A sensitivity analysis methodology recently developed by the authors is applied to COAMPS and WRF. The method involves varying model parameters according to Latin Hypercube Sampling, and developing multivariate multiple regression models that map the model parameters to forecasts over a spatial domain. The regression coefficients and p values testing whether the coefficients are zero serve as measures of sensitivity of forecasts with respect to model parameters. Nine model parameters are selected from COAMPS and WRF, and their impact is examined on nine forecast quantities (water vapor, convective and gridscale precipitation, and air temperature and wind speed at three altitudes). Although the conclusions depend on the model parameters and specific forecast quantities, it is shown that sensitivity to model parameters is often accompanied by nontrivial spatial structure, which itself depends on the underlying forecast model (i.e., COAMPS vs WRF). One specific difference between these models is in their sensitivity with respect to a parameter that controls temperature increments in the Kain–Fritsch trigger function; whereas this parameter has a distinct spatial structure in COAMPS, that structure is completely absent in WRF. The differences between COAMPS and WRF also extend to the quality of the statistical models used to assess sensitivity; specifically, the differences are largest over the waters off the southeastern coast of the United States. The implication of these findings is twofold: not only is the spatial structure of sensitivities different between COAMPS and WRF, the underlying relationship between the model parameters and the forecasts is also different between the two models.