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Xiaoyan Wei
,
Mohit Kumar
, and
Henk M. Schuttelaars

Abstract

A semianalytical three-dimensional model is set up to dynamically calculate the coupled water motion and salinity for idealized well-mixed estuaries and prognostically investigate the influence of each physical mechanism on the residual salt transport. As a study case, a schematized estuary with an exponentially converging width and a channel–shoal structure is considered. The temporal correlation between horizontal tidal velocities and tidal salinities is the dominant process for the landward residual salt transport. The residual salt transport induced by residual circulation is locally significant, but the induced salt transport integrated over the cross section is small. The impacts of the estuarine geometry, Coriolis force, and bathymetry on the salt dynamics are studied using three dedicated experiments, in which the impact of each of these factors is studied separately. To assess the impact of width convergence, a convergent estuary without bathymetric variations or Coriolis force is considered. In this experiment, the temporal correlation between tidal velocities and salinities is the only landward salt transport process. In the second experiment, Coriolis effects are included. This results in a significant residual salt transport cell due to the advection of the tidally averaged salinity by residual circulation, with salt imported into the estuary from the left side and exported on the right (looking seaward). In the last experiment, a lateral channel–shoal structure is included while the Coriolis effects are excluded. This results in a significant landward salt transport through the deeper channel and a seaward salt transport over the shoals due to the advection of the tidally averaged salinity by residual circulation.

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Xiaoyan Wei
,
George P. Schramkowski
, and
Henk M. Schuttelaars

Abstract

Understanding salt dynamics is important to adequately model salt intrusion, baroclinic forcing, and sediment transport. In this paper, the importance of the residual salt transport due to tidal advection in well-mixed tidal estuaries is studied. The water motion is resolved in a consistent way with a width-averaged analytical model, coupled to an advection–diffusion equation describing the salt dynamics. The residual salt balance obtained from the coupled model shows that the seaward salt transport driven by river discharge is balanced by the landward salt transport due to tidal advection and horizontal diffusion. It is found that the tidal advection behaves as a diffusion process, and this contribution is named tidal advective diffusion. The horizontal diffusion parameterizes processes not explicitly resolved in the model and is called the prescribed diffusion. The tidal advective diffusion results from the correlation between the tidal velocity and salinity and can be explicitly calculated with the dominant semidiurnal water motion. The sensitivity analysis shows that tidal advective diffusivity increases with increasing bed roughness and decreasing vertical eddy viscosity. Furthermore, tidal advective diffusivity reaches its maximum for moderate water depth and moderate convergence length. The relative importance of tidal advective diffusion is investigated using the residual salt balance, with the prescribed diffusion coefficient obtained from the measured salinity field. The tidal advective diffusion dominates the residual salt transport in the Scheldt estuary, and other processes significantly contribute to the residual salt transport in the Delaware estuary and the Columbia estuary.

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Qingnong Xiao
,
Ying-Hwa Kuo
,
Zaizhong Ma
,
Wei Huang
,
Xiang-Yu Huang
,
Xiaoyan Zhang
,
Dale M. Barker
,
John Michalakes
, and
Jimy Dudhia

Abstract

The tangent linear and adjoint of an adiabatic version of the Weather Research and Forecasting (WRF) Model with its Advanced Research WRF (ARW) dynamic core have been developed. The source-to-source automatic differentiation tool [i.e., the Transformation of Algorithm (TAF) in FORTRAN] was used in the development. Tangent linear and adjoint checks of the developed adiabatic WRF adjoint modeling system (WAMS) were conducted, and all necessary correctness verification procedures were passed. As the first application, the adiabatic WAMS was used to study the adjoint sensitivity of a severe windstorm in Antarctica. Linearity tests indicated that an adjoint-based sensitivity study with the Antarctic Mesoscale Prediction System (AMPS) 90-km domain configuration for the windstorm is valid up to 24 h. The adjoint-based sensitivity calculation with adiabatic WAMS identified sensitive regions for the improvement of the 24-h forecast of the windstorm. It is indicated that the windstorm forecast largely relies on the model initial conditions in the area from the south part of the Trans-Antarctic Mountains to West Antarctica and between the Ross Ice Shelf and the South Pole. Based on the sensitivity analysis, the southerly or southeasterly wind at lower levels in the sensitivity region should be larger, the cyclone should be stronger, and the atmospheric stratification should be more stable over the north slope of the Trans-Antarctic Mountain to the Ross Ice Shelf, than the AMPS analyses. By constructing pseudo-observations in the sensitivity region using the gradient information of forecast windstorm intensity around McMurdo, the model initial conditions are revised with the WRF three-dimensional variational data assimilation, which leads to significant improvement in the prediction of the windstorm. An adjoint sensitivity study is an efficient way to identify sensitivity regions in order to collect more observations in the region for better forecasts in a specific aspect of interest.

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Xiaoyan Wei
,
Henk M. Schuttelaars
,
Megan E. Williams
,
Jennifer M. Brown
,
Peter D. Thorne
, and
Laurent O. Amoudry

Abstract

Asymmetric tidal turbulence (ATT) strongly influences estuarine health and functioning. However, its impact on the three-dimensional estuarine dynamics and the feedback of water motion and salinity distribution on ATT remain poorly understood, especially for short estuaries (estuarine length ≪ tidal wavelength). This study systematically investigates the abovementioned interactions in a short estuary for the first time, considering periodically weakly stratified conditions. This is done by developing a three-dimensional semi-analytical model (combining perturbation method with finite element method) that allows a dissection of the contributions of different processes to ATT, estuarine circulation, and salt transport. The generation of ATT is dominated by (i) strain-induced periodic stratification and (ii) asymmetric bottom-shear-generated turbulence, and their contributions to ATT are different both in amplitude and phase. The magnitude of the residual circulation related to ATT and the eddy viscosity–shear covariance (ESCO) is about half of that of the gravitational circulation (GC) and shows a “reversed” pattern as compared to GC. ATT generated by strain-induced periodic stratification contributes to an ESCO circulation with a spatial structure similar to GC. This circulation reduces the longitudinal salinity gradients and thus weakens GC. Contrastingly, the ESCO circulation due to asymmetric bottom-shear-generated turbulence shows patterns opposite to GC and acts to enhance GC. Concerning the salinity dynamics at steady state, GC and tidal pumping are equally important to salt import, whereas ESCO circulation yields a significant seaward salt transport. These findings highlight the importance of identifying the sources of ATT to understand its impact on estuarine circulation and salt distribution.

Open access
Xiang-Yu Huang
,
Qingnong Xiao
,
Dale M. Barker
,
Xin Zhang
,
John Michalakes
,
Wei Huang
,
Tom Henderson
,
John Bray
,
Yongsheng Chen
,
Zaizhong Ma
,
Jimy Dudhia
,
Yongrun Guo
,
Xiaoyan Zhang
,
Duk-Jin Won
,
Hui-Chuan Lin
, and
Ying-Hwa Kuo

Abstract

The Weather Research and Forecasting (WRF) model–based variational data assimilation system (WRF-Var) has been extended from three- to four-dimensional variational data assimilation (WRF 4D-Var) to meet the increasing demand for improving initial model states in multiscale numerical simulations and forecasts. The initial goals of this development include operational applications and support to the research community. The formulation of WRF 4D-Var is described in this paper. WRF 4D-Var uses the WRF model as a constraint to impose a dynamic balance on the assimilation. It is shown to implicitly evolve the background error covariance and to produce the flow-dependent nature of the analysis increments. Preliminary results from real-data 4D-Var experiments in a quasi-operational setting are presented and the potential of WRF 4D-Var in research and operational applications are demonstrated. A wider distribution of the system to the research community will further develop its capabilities and to encourage testing under different weather conditions and model configurations.

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Dale Barker
,
Xiang-Yu Huang
,
Zhiquan Liu
,
Tom Auligné
,
Xin Zhang
,
Steven Rugg
,
Raji Ajjaji
,
Al Bourgeois
,
John Bray
,
Yongsheng Chen
,
Meral Demirtas
,
Yong-Run Guo
,
Tom Henderson
,
Wei Huang
,
Hui-Chuan Lin
,
John Michalakes
,
Syed Rizvi
, and
Xiaoyan Zhang

Data assimilation is the process by which observations are combined with short-range NWP model output to produce an analysis of the state of the atmosphere at a specified time. Since its inception in the late 1990s, the multiagency Weather Research and Forecasting (WRF) model effort has had a strong data assimilation component, dedicating two working groups to the subject. This article documents the history of the WRF data assimilation effort, and discusses the challenges associated with balancing academic, research, and operational data assimilation requirements in the context of the WRF effort to date. The WRF Model's Community Variational/Ensemble Data Assimilation System (WRFDA) has evolved over the past 10 years, and has resulted in over 30 refereed publications to date, as well as implementation in a wide range of real-time and operational NWP systems. This paper provides an overview of the scientific capabilities of WRFDA, and together with results from sample operation implementations at the U.S. Air Force Weather Agency (AFWA) and United Arab Emirates (UAE) Air Force and Air Defense Meteorological Department.

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