1. Introduction
Turbulence contributes to many atmospheric phenomena, including atmospheric convection and clouds. An important quantity that characterizes the smallest scales of such flows is the mean turbulence kinetic energy (TKE) dissipation rate ε. In formulating subgrid models for large-eddy simulation (Moeng and Sullivan 1994; Patton et al. 1998) or Lagrangian trajectory analysis of passive scalars (Poggi and Katul 2006), a robust estimation of the TKE dissipation-rate profile is needed.
Several methods have been proposed to calculate ε from one-dimensional (1D) velocity time series by making use of the local isotropy assumption. Indirect methods are based on the inertial-range arguments that follow from Kolmogorov’s hypotheses (Kolmogorov 1941; Albertson et al. 1997). Such methods are commonly used in the analysis of low- and moderate-resolution velocity time series of in situ airborne measurements (Sharman et al. 2014; Kopeć et al. 2016a). In the case of fully resolved velocity signals, the direct methods, based on measuring the mean variance of velocity fluctuation gradients, can be applied. Alternatively, Sreenivasan et al. (1983) proposed the zero-crossing approach, which requires counting the number of times per unit length the velocity signal crosses the zero threshold, denoted by

Description of zero-crossing approach.
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Description of zero-crossing approach.
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Description of zero-crossing approach.
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
The first method is based on a successive filtering of the velocity signal, assuming that turbulence is homogeneous and isotropic and that the inertial scaling of −5/3 holds. In the second approach, an analytical model for the unresolved section of the spectrum is used to calculate a correcting factor to
The abovementioned methods for ε retrieval are based on the local isotropy assumption. However, this assumption might not always be fulfilled in real atmospheric conditions (Chamecki and Dias 2004; Jen-La Plante et al. 2016). Buoyancy is one reason for anisotropy in atmospheric flows. The energy spectra of buoyancy-driven turbulence has been studied by several authors (Bolgiano 1959; Lumley 1964; Lindborg 2006; Waite 2011; Kumar et al. 2014). First Bolgiano (1959) and Obukhov (1959) proposed the energy spectrum should scale as
Physically complex atmospheric turbulence is not only inhomogeneous or buoyancy driven, but also includes the coexistence of laminar and turbulent regions called external intermittency (Lighthill 1956; Kurowski et al. 2009). The volume fraction occupied by a turbulent flow is called the intermittency factor γ. The motivation of this work is to investigate how the presence of anisotropy due to buoyancy and external intermittency affects the various retrieval techniques of ε in the atmospheric configurations, including the novel ones based on the number of crossings. Moreover, as the data used for the retrieval techniques are not idealized as DNS output, analysis of low-pass filtered velocity time series is undertaken, as measured by an artificial aircraft flying through the cloud, to assess performance of the methods. All the ε estimates are compared with actual ε values from DNS of the mixing layer at the stratocumulus cloud top. In spite of the inhomogeneity and physical complexity of the flow, the calculated ε profiles generally agree with DNS values within a certain degree of accuracy. The observed deviations follow from the physical complexity of the flow and low Reynolds number (Re) of the DNS as compared to real atmospheric conditions. The latter issue makes the spectral retrieval methods difficult due to the relatively short inertial range. Further, an additional source of errors includes the deviations of the Taylor-to-Liepmann scale ratio from unity, as the assumption
Due to the abovementioned difficulties, the present work focuses on the second method proposed in Wacławczyk et al. (2017), based on an analytical model to resolving the missing part of the spectrum. We propose its alternative form, replacing the Liepmann scale with the Taylor microscale. Results obtained with this new approach compare favorably with the DNS over a wide range of cutoff wavenumbers.
This paper is structured as follows: In section 2 we describe the current state of knowledge and propose modification of the iterative method. The setup of the case study used in our analysis is explained in section 3. In sections 4 and 5 results of the TKE dissipation-rate retrieval are presented. Section 6 provides conclusions of the analysis results.
2. TKE dissipation-rate estimates from 1D signals
a. Direct and indirect methods





The methods used to retrieve the TKE dissipation rate from 1D signals can be divided into two categories: direct and indirect. In direct methods the gradients of velocity are measured. Indirect methods relate the small-scale phenomenon of dissipation with inertial-range scales, as predicted by Kolmogorov’s second hypothesis (Kolmogorov 1941). Additionally, all methods are based on the local isotropy assumption (Kolmogorov 1941).








































































b. Methods based on number of crossings







We note in passing that the scaling of
The second method is based on recovering the missing part of the spectrum in the inertial and dissipative range, by introducing a correcting factor to the number of crossings per unit length. As such, this method can be treated as a smooth blending between indirect and direct methods as it recovers the former as the filter cutoff moves into the inertial range and the latter as the filter cutoff moves into the dissipative range.






























In this method, the cutoff kcut may be placed in the inertial or dissipative range. In the latter case, the spectral retrieval methods may lead to loss of certain information as they are based on the inertial-range scaling only. In Wacławczyk et al. (2017), performance of the new methods was tested on measurement data obtained during the POST airborne research campaign (Gerber et al. 2013; Malinowski et al. 2013) with the cutoff placed well in the inertial range. It was shown that estimates obtained with the new methods were comparable with results of standard retrieval techniques; however, differing responses to errors due to finite sampling and finite averaging windows were observed. Hence, the new methods can complement the standard techniques to increase robustness of ε retrieval.
c. Alternative formulation of the iterative method
Estimates of













In this work, we will investigate and compare the performance of both approaches from Wacławczyk et al. (2017) and the new Eq. (27) with different model assumptions for
3. Stratocumulus cloud-top mixing-layer simulation for DYCOMS II RF01 case
As a test case, we consider a cloud-top mixing layer. This system mimics the cloud-top region of stratocumulus clouds and proves convenient in studying some aspects associated with submeter scales, like evaporative cooling, as simulations of the complete boundary layer cannot reach these small grid spacings (Mellado et al. 2010; Mellado 2017; Mellado et al. 2018). The system consists of two horizontal layers of moist air: an upper region, which is warm and unsaturated and represents the free troposphere, and a lower region, which is cool and saturated and represents the cloud. In-cloud turbulence and the vertical wind shear across the cloud top creates the cloud-top mixing layer that is illustrated in Fig. 2. In-cloud turbulence is driven by the longwave radiative cooling of the cloud top and by the evaporative cooling caused by the mixing of cloudy and tropospheric air. Radiative cooling is characterized by the net upward radiative flux

Vertical cross section of the liquid water specific humidity in the cloud-top mixing layer. Gray colors indicate regions with
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Vertical cross section of the liquid water specific humidity in the cloud-top mixing layer. Gray colors indicate regions with
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Vertical cross section of the liquid water specific humidity in the cloud-top mixing layer. Gray colors indicate regions with
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
The horizontal size of the computational domain is
Figure 3 includes vertical profiles of the mean velocity;

Velocity field data in the cloud-top mixing layer. The upper horizontal black line indicates the height of minimum buoyancy flux (horizontal plane
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Velocity field data in the cloud-top mixing layer. The upper horizontal black line indicates the height of minimum buoyancy flux (horizontal plane
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Velocity field data in the cloud-top mixing layer. The upper horizontal black line indicates the height of minimum buoyancy flux (horizontal plane
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
4. TKE dissipation-rate estimates from inertial-range scaling
a. DNS signals
The methods related to the local isotropy assumption and inertial-range scaling are commonly used to analyze 1D signals from airborne measurements. At the same time, turbulent flows in clouds or atmospheric boundary layers are in fact inhomogeneous and buoyant. The purpose of this analysis is to check how predictions of these methods, when applied to DNS data, compare with the true value of
We first investigated 1D spectra of three velocity components u, υ, and w (see Figs. 4–6, respectively). To calculate the compensated spectra, we multiplied each

Compensated 1D velocity spectra (dimensionless) of the u velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Compensated 1D velocity spectra (dimensionless) of the u velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Compensated 1D velocity spectra (dimensionless) of the u velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Compensated 1D velocity spectra (dimensionless) of the υ velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Compensated 1D velocity spectra (dimensionless) of the υ velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Compensated 1D velocity spectra (dimensionless) of the υ velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Compensated 1D velocity spectra (dimensionless) of the w velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Compensated 1D velocity spectra (dimensionless) of the w velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Compensated 1D velocity spectra (dimensionless) of the w velocity component at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
We observe similar profiles of corresponding compensated spectra at planes
In the following, we investigate to what extent deviations from the K41 theory observed in Figs. 4–6 affect estimations of ε. To estimate

Scaling of
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Scaling of
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Scaling of
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Next, we estimate

Second- and third-order structure functions of u in x at horizontal plane
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Second- and third-order structure functions of u in x at horizontal plane
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Second- and third-order structure functions of u in x at horizontal plane
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
In isotropic turbulence, all estimates of ε should, theoretically, be equal. It would hence seem appropriate to use the same fitting ranges for
Table 1 presents results for the plane
Values of dissipation rate calculated at horizontal plane




















TKE dissipation rates in CTL
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

TKE dissipation rates in CTL
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
TKE dissipation rates in CTL
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Table 2 shows the corresponding fits for the horizontal profile
Values of dissipation rate calculated for horizontal plane


As it is seen in Tables 1 and 2, the estimates of ε from the vertical velocity component w differ from those based on horizontal components. They are overpredicted in comparison to
We compare ε estimates using the two different fitting ranges from Tables 1 and 2 (averaged over the four signals u in x, u in y, υ in x, and υ in y) in Figs. 10a and 10b. The structure function’s fitting ranges give better results. We can observe that

Normalized average TKE dissipation rates calculated from Eqs. (8), (9), and (18) as a function of vertical coordinate
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Normalized average TKE dissipation rates calculated from Eqs. (8), (9), and (18) as a function of vertical coordinate
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Normalized average TKE dissipation rates calculated from Eqs. (8), (9), and (18) as a function of vertical coordinate
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
b. Moderate- and low-resolution signals
Signals available from in situ airborne measurements are far from the idealized fully resolved DNS data. Finite sampling frequency of a sensor and measurement errors induce effective spectral cutoff of velocity time series. To investigate the influence of the finite sampling on the TKE dissipation-rate estimates, we perform the following tests of DNS data. We consider a virtual aircraft that measures velocity signal with effective cutoff wavenumbers,

Normalized TKE dissipation-rate estimates from signals with effective cutoffs
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Normalized TKE dissipation-rate estimates from signals with effective cutoffs
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Normalized TKE dissipation-rate estimates from signals with effective cutoffs
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Next, in order to test scatter of the results we estimate

Profiles of
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Profiles of
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Profiles of
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An additional method makes it possible to decrease statistical uncertainties of the TKE dissipation-rate estimates. Figure 13 presents standard errors of

Standard errors of
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Standard errors of
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Standard errors of
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
The obtained results confirm the method based on the number of crossings responds differently to errors due to finite sampling than the spectral retrieval technique. It can also complement standard approaches to reduce the standard error of the mean TKE dissipation rate.
5. TKE dissipation-rate estimation with the direct and iterative methods
a. Direct methods
Results discussed in section 4 reveal TKE dissipation-rate recovery based on inertial-range arguments is difficult in the considered flow case. The first source of error relates to the relatively low Re of DNS simulations. The available DNS data allow the estimation of ε from the direct methods. We calculated
At the plane

The plot of TKE dissipation-rate estimates normalized by
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

The plot of TKE dissipation-rate estimates normalized by
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
The plot of TKE dissipation-rate estimates normalized by
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
b. Two formulations of the iterative method
In this section, we consider the second, iterative approach from Wacławczyk et al. (2017), described in section 2b, where the cutoff can be moved toward the dissipative part of the spectrum. We test different models for the function
Figure 15 presents model spectra of u in x for the horizontal plane

Compensated spectrum of u in x (dimensionless) at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Compensated spectrum of u in x (dimensionless) at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Compensated spectrum of u in x (dimensionless) at
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Next, we investigate a DNS signal that is first low-pass filtered with the use of a sixth-order Butterworth filter with a given
Figure 16 shows the difference between

The plot of ε normalized by
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

The plot of ε normalized by
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
The plot of ε normalized by
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c. 
ratio as the intermittency measure

The motivation of the present subsection is to understand the reason for the strong deviations of the
In the literature, several different methods were proposed to differentiate between rotational (turbulent) and irrotational (nonturbulent) parts of a measured velocity signal (Zhang et al. 1996). Each requires definition of an indicator function q, a criterion function














Values of the intermittency factor calculated from the enstrophy and
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1

Values of the intermittency factor calculated from the enstrophy and
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
Values of the intermittency factor calculated from the enstrophy and
Citation: Journal of the Atmospheric Sciences 76, 5; 10.1175/JAS-D-18-0146.1
We observe favorable agreement between both curves, at least for larger γ values. Discrepancies for small γ are due to numerical errors, as both
6. Conclusions
In this work, we focus on scaling of the energy spectra of turbulent flows in stratocumulus clouds and investigate different methods of TKE dissipation-rate retrieval from 1D intersections of the flow domain. We investigate data from numerical experiments in the stratocumulus cloud-top mixing-layer simulations. In such experiments, high Re observed in nature could not be reached; however, we argue model assumptions can still be tested, enabling conclusions applicable to “real world” flows to be drawn. Finite sampling frequency of a sensor and measurement errors deteriorate results of airborne experiments. Comparison with high-resolution numerical simulations might help to estimate the role of resulting effective cutoff frequencies and aliasing.
The investigated flow case appeared largely influenced by buoyancy effects that cause deviations from the Kolmogorov scaling. This, in turn, results in errors of the TKE dissipation-rate retrieval based on local isotropy assumption. We found the longitudinal spectra of horizontal velocity components
In this work, we investigated different methods of TKE dissipation-rate retrieval, including the two approaches based on the number of crossings per length proposed in Wacławczyk et al. (2017). The first method used the inertial-range arguments and provided scaling of
The second method proposed in Wacławczyk et al. (2017) was based on the recovery of the missing part of the spectrum, that is, the part with k higher than the cutoff wavenumber
We proposed an alternative formulation of the second method, where the variance of velocity derivative is used instead of the number of crossings per length. The remaining procedure is consistent; that is, the correction factor for the missing part of the spectrum and ε are calculated iteratively. Results compare very favorably with the DNS data. This also suggests that the dissipative part of the spectrum has a universal form with a prescribed dependence on ε.
This study revealed that novel methods for TKE dissipation-rate retrieval can complement standard approaches. A perspective for a further study is to test their performance on a larger set of experimental data.
Acknowledgments
This work received funding from the EU Horizon 2020 Research and Innovation Programme under the Marie Sklodowska-Curie Actions, Grant Agreement 675675. MW and SPM acknowledge matching funds from the Polish Ministry of Science and Higher Education 341832/PnH/2016. The authors acknowledge the proofreading of the manuscript by Kristin Goździkowska.
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