1. Introduction
In research on patterns of carbon cycling in terrestrial ecosystems, much attention has been paid to investigate whether an ecosystem is a net source or sink for atmospheric CO2, to examine factors affecting this source or sink, and to estimate the trends in carbon (C) balance for the future (Mooney et al. 1991; Ryan 1991; Shaver et al. 1992; Schimel 1995; Goulden et al. 1998; Malhi et al. 1999; Valentini et al. 2000; Brix et al. 2001; Flanagan et al. 2002; Houghton 2003; Dunn et al. 2007; Waddington and Roulet 2008). Wetlands are expected to contribute to global carbon dynamics through the exchange of CO2 and CH4. Long-term carbon accumulation in terrestrial ecosystems may be relevant either to forests that produce large amounts of recalcitrant lignified tissue or wetlands where the anaerobic conditions in soils reduce decomposition by soil microbes (Brix et al. 2001). The organic carbon reserve in wetlands is estimated to represent around 15% of the reserve of terrestrial organic carbon on earth (Sabine et al. 2004).
The common reed Phragmites australis (P. australis) is widespread throughout wetlands worldwide; this species is found on every continent, except Antarctica, from subarctic to warm temperate zones (Osada 1993; Clevering and Lissner 1999; Brix et al. 2001). It is a C3 plant and a perennial grass, which typically forms closed and monodominant stands in the littoral zone of lakes, ponds, along rivers, and in marshes (Brix 1999). Throughout the twentieth century, the distribution of the species was enlarged and P. australis was reported in all of the lower 48 U.S. states and across southern Canada (Chambers et al. 1999; Saltonstall 2002). The species is regarded as an aggressive invader in North America (Chambers et al. 1999; Rice et al. 2000). On the other hand, in Europe, the balance between the progression and regression of the species has recently shifted toward a process of die back, resulting in setting up of the European research project on reed die-back and progression (EUREED) project to investigate the mechanisms of such phenomena (Brix 1999). Besides, P. australis–dominated wetlands are important vegetation types because the species has pressurized gas-flow aeration functions that enhance the transfer of CO2 and CH4 from sediments to the atmosphere (Armstrong and Armstrong 1990; Brix et al. 1992, 1996). Furthermore, the wetlands have high annual net primary productivity (Brix et al. 2001). Therefore, it is valuable to investigate carbon dynamics of P. australis–dominated wetlands.
A main focus of many research studies in terrestrial carbon dynamics is on CO2 exchange rates of ecosystems. To estimate ecosystem carbon balance, continuous gas exchange measurements are essential on hourly to yearly time scales. The eddy covariance technique is now widely used to assess CO2 exchange rates of an entire ecosystem across a spectrum of time scales, ranging from seconds to years, by measuring the covariance between the fluctuations in vertical wind velocity and CO2 mixing ratio (Baldocchi 2003). Quantifying the temporal variation in ecosystem CO2 exchange rates at one site helps to clarify the effects of environmental variation on ecosystem physiological processes. Data gathered during fluctuations in environmental conditions are useful to develop physiological response curves for whole-ecosystem response to changes in temperature, light, and so on (Margolis et al. 2006). The net CO2 exchange rate of terrestrial ecosystems is actuated by the balance between the CO2 input by photosynthesis and its output by emission through plant and soil respiration. The carbon dynamics model infers that terrestrial ecosystems will ultimately shift from a net sink to a source of CO2 because respiration rate increases faster than photosynthetic rate as ecosystems acclimate to climate change (Cox et al. 2000). Therefore, it is very important to validate the model under simulated environmental changes such as artificial warming and increased air CO2 concentration at the ecosystem level.
The Closed Geosphere Experiment Facility (CGEF) located in northeastern Japan (40°53′N, 141°16′E) was designed to investigate carbon dynamics in terrestrial ecosystems. A wetland ecosystem with P. australis–dominated vegetation was introduced along with soil into the CGEF from a wild wetland in December 2006 and the ecosystem was verified to have been properly reconstructed from physicochemical and biological viewpoints (Suzuki and Endo 2007). It is highly watertight so that no leaching of dissolved organic carbon occurs from it. Air leakage from the facility is very small and its contribution to carbon balance has been found to be less than 0.5% (Suzuki et al. 2010b). As such, the CGEF has a number of advantages that make it useful in understanding ecosystem behavior within an environment with regulated variables. Its regulated environmental factors include air temperature and CO2 concentration that influence the carbon cycles of ecosystems (Suzuki et al. 2010a). In counterpoint to these benefits, the controlled environment does not represent a natural environment, which introduces its own disadvantages.
Using the CGEF, we made plans to investigate carbon dynamics of P. australis–dominated wetlands and to examine the responses of the wetlands to artificial environmental changes through the facility’s capability for controlling wetland environmental conditions. The objectives in this paper are 1) to estimate CO2 exchange rates [net ecosystem productivity (NEP), gross primary productivity (GPP), and ecosystem respiration rate (Re)] of the introduced wetland in the CGEF and 2) to investigate the factors governing the CO2 exchange rates.
2. Materials and methods
a. Introduction of a wetland ecosystem into the CGEF
The CGEF includes a geosphere module (GM) and a geosphere material circulation system (GMCS). The roof and three (south, east, and west) sides of the GM are covered with glass panels so that natural light can be introduced. The GM is airtight and its glass panels are set in special silicone gaskets to prevent both air outflow and inflow. The GM has a ground area of 5.8 × 8.7 m2 and 11.9-m average height including a soil depth space of 3.1 m (Fig. 1a). The GMCS is composed of two subsystems: an air process subsystem and a freshwater process subsystem. The air process subsystem has a pressure controller, a CO2 and an O2 scrubber, a CO2 and an O2 tank, an air composition adjuster, and an air conditioner. This subsystem controls air temperature and CO2 concentration in the GM. The freshwater process subsystem has a freshwater processor and an artificial rain generator. This subsystem supplies water to soil and plants in the GM (Suzuki et al. 2010a).

(a) External appearance of CGEF. (b) Introduced wetland involving Phragmites australis–dominated vegetation and soil in the CGEF. Boardwalks were placed above the ground surface to avoid disturbing plants and soil during the measurements and sampling.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

(a) External appearance of CGEF. (b) Introduced wetland involving Phragmites australis–dominated vegetation and soil in the CGEF. Boardwalks were placed above the ground surface to avoid disturbing plants and soil during the measurements and sampling.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
(a) External appearance of CGEF. (b) Introduced wetland involving Phragmites australis–dominated vegetation and soil in the CGEF. Boardwalks were placed above the ground surface to avoid disturbing plants and soil during the measurements and sampling.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
A wetland ecosystem dominated by the common reed P. australis was introduced into the GM in December 2006 from a wild wetland (40°93′N, 141°36′E). A preliminary study was conducted in the wild wetland. A 3-m soil core was taken and soil characteristics were investigated to determine the soil depth for introduction from the wild wetland to the GM. The vertical profile of the total C content in the soil had the following values: 8.4, 3.0–4.2, and 2.4–3.8 mg C g−1 soil at 0–0.2-, 0.2–1.0-, and 1.0–3.0-m depths, respectively. A similar trend for the vertical profile was observed for microbial biomass carbon content: 422 μg C g−1 soil at 0–0.2-m depth, 11–95 μg C g−1 soil at 0.2–1.0-m depth, and almost none detected at 1.0–3.0-m depth (Suzuki and Endo 2007). The preliminary study showed that soil below 1-m depth was expected to contribute little to the carbon cycle in the wetland ecosystem. Blocks of rhizospheric soil were removed from the wild wetland using a 1.5 × 1.0 × 0.45 m3 iron frame to minimize damage to the rhizomes and roots. Commercial sea sand was washed with water and used to fill the soil depth space from the bottom at 3.1–1 m from the space top height. Sand collected from the wild wetland was placed on top of the sea sand to form a layer from 1 to 0.45 m from the space top height. Twenty-seven blocks of rhizospheric soil were tightly configured on the second layer to finish filling of the soil depth space. Rhizomes and roots were mostly present up to a depth of 0.3 m from the surface, indicating that the blocks sufficiently included the rhizosphere. All layers were hydraulically filled with groundwater collected from the wild wetland. From the next growing season (i.e., May 2007), P. australis grew well, and its growth (about 2-m height) was similar to that in the wild wetland (Fig. 1b). The initial value of below-ground biomass carbon was 978 g C m−2 obtained using a core sampling method.
Subsequently, soil and groundwater characteristics and carbon fluxes were investigated to estimate the effects of disturbance on the newly introduced wetland ecosystem. Soil redox potential (−193 to −227 mV), which affects CH4 production, in the GM was similar to that of the wild wetland. Particle size distribution (dominant size: 106–250 μm) of the soil profile in the GM was also similar to that of the wild wetland. Free groundwater characteristics were also investigated. No statistically significant differences (p > 0.05; Mann–Whitney U test) were found for pH (8.11–8.41) and electrical conductance (373–442 mS m−1) between the GM and the wild wetland. Furthermore, no statistically significant difference (p > 0.05; Mann–Whitney U test) in fluxes of CO2 (9.0–12.8 mg C m−2 h−1) and CH4 (0.11–0.23 mg C m−2 h−1) from the soil between the GM and the wild wetland was observed by a closed chamber method. These results suggested that the wetland ecosystem was properly reconstructed in the GM from physicochemical and biological viewpoints (Suzuki and Endo 2007).
b. Control and measurement of environmental conditions
The experiment for the measurement of the ecosystem CO2 exchange rates was conducted from 1 January to 31 December 2009. During the experiment, environmental conditions were controlled according to the following procedure. During the entire experimental year, we configured air temperatures in the GM to recreate the daily shifts and seasonal variations in air temperature based on the 5-yr (2001–05) average hourly air temperature at the location (40°53′N, 141°16′E) near the wild wetland. The CGEF was able to control the average air temperature within 1°C of a set value during the plant growing season (Suzuki et al. 2010a); however, during the winter period from December to February, when the above-ground shoots were completely senesced, it was difficult to control the air temperature in the GM to match that in the wild wetland. Relative humidity was controlled to approximately 60%. Light intensity was a passive condition because the GM had glass areas in the roof and walls that admitted natural light, and no electrical lighting was present (Fig. 1a).
The CGEF had a CO2 scrubber comprising the following: CO2 canisters that used solid amine as a CO2 absorber, vacuum pumps; a compressor, hot/cold water pumps and tanks, an accumulator, and a postsorber that removed odors generated from the amine. The CO2 was scrubbed continuously by switching (adsorb/regenerate) two CO2 canisters. Scrubbed CO2 was stored in an accumulator and subsequently transferred to a CO2 tank. Therefore, the CO2 scrubber provided continuous CO2 removal from the GM. When the CO2 concentration increased above an upper set value (420 ppm), the CO2 scrubber was turned on. When it decreased below a lower set value (360 ppm), CO2 was supplied (Suzuki et al. 2010a). In this study, we tried to control air CO2 concentration in GM to approximately 370 ppm.
Meteorological variables in the GM were continuously measured and automatically logged. As required, air was circulated by fans inside the GM to maintain steady air temperature and CO2 concentration, which were measured every minute using a platinum resistance sensor (HM119; Oyo Electronics, Ltd., Tokyo, Japan) and an infrared gas analyzer (IRGA) (ZKJ-SZ; Fuji Electric Systems Co., Ltd., Tokyo, Japan), respectively. The CO2 concentrations were automatically corrected by the software in the IRGA instrument using simultaneously measured air temperature, pressure, and water vapor content. Calibration of the IRGA was automatically carried out once a week throughout the experiment period. The accuracy of CO2 concentration was 20 ppm, evaluated as the root-mean-square error (RMSE) in the range of the CO2 concentration in the experiment using standard CO2 gas. Photosynthetic photon flux density (PPFD) was evaluated with a quantum sensor [PAR-01 (L); Prede Co., Ltd., Tokyo, Japan], which measured global solar radiation from 400 to 700 nm and approximated the spectral band active in photosynthesis; this was done at 30-min intervals above the vegetation canopy (4.5-m height above the ground surface). Soil temperatures at 50 mm below the soil surface (10 replications) were also recorded using a thermal sensor with a built-in datalogger (Stowaway Tidbit; Onset Computer, Pocasset, Massachusetts). The water table was monitored and values were logged automatically every minute using a submersion level detector (SL-710C; JFE Advantech Co., Ltd., Nishinomiya, Japan). Artificial rain was simulated by a sprinkler in the GM that was turned on almost every day from late June to December, and the precipitation was found to be equivalent to the decline in the water table in the wetland due to evapotranspiration.
The site in the GM experienced seasonal variation in environmental conditions (Fig. 2). Mean monthly air temperature ranged from 5.7° to 19.5°C, with the lowest temperature in January and the highest temperature in August (Fig. 2a). Soil temperature showed a similar trend to air temperature; however, the temperature range in soil (6.8°–15.2°C) was smaller than that in air (Fig. 2b). The water table was stable and had high values from January to early June. During that period, we could not provide artificial rain because the freshwater process subsystem had technical problems, so the water separated from the air in the GM for controlling air humidity was immediately put back into the wetland soil through a tube. During late June–December, we provided artificial rain almost once a day, resulting in a large fluctuation in the water table (Fig. 2c). Daily PPFD was highest in April but values were not high during the summer (Fig. 2d). The sunshine durations during the plant growing season at the nearest weather station (40°53′N, 141°16′E) were 224.5, 195.0, 121.8, 113.4, 87.7, 163.7, 173.4, and 84.2 h per month for April, May, June, July, August, September, October, and November, respectively (Japan Meteorological Agency 2009). The decline in the sunshine duration during summer resulted in a lower PPFD per month. The phenomenon may be caused by the cold northeasterly wind, called the “Yamase wind,” which sometimes blows over northeastern Japan and induces clouds from spring to summer (Kanno 1997). Lessmann et al. (2001) investigated the photosynthetic rate against the light intensity and showed that the photosynthetic rate was saturated in the range of PPFD from 1000–1500 μmol m−2 s−1 for four P. australis populations distributed throughout Europe. In the GM, PPFD attained a level of 1500 μmol m−2 s−1 above the vegetation canopy (data not shown). The amount of diffuse light at the canopy height of the wetland may be higher in the GM than in the wild wetland because of reflection by the surrounding glass panels of the GM. Air CO2 concentrations were higher during the nongrowing season for above-ground plants (January–March and December). During that period, we did not need to maintain air CO2 concentration at ca. 370 ppm because no carbon assimilation was occurring by plant photosynthesis. Moreover, we could not use the CO2 scrubber because of maintenance work in December 2009. We controlled air CO2 concentration during the remaining period, resulting in a range from 376 to 433 ppm of the average concentration during the daytime (Fig. 2e). Soil cores (0.3-m depth) were sampled at nine points three times (July, September, and November 2009) in the GM. Each soil core was divided into three depths (0–0.1, 0.1–0.2, and 0.2–0.3 m). The soil carbon concentration was measured (Sumigraph NC22F; Sumika Chemical Analysis Service, Tokyo) and found to be 2.34 ± 0.40% (mean ± SE, where SE is standard error, n = 81).

Seasonal changes in major environmental conditions in the GM. (a) Daily average air temperature, (b) daily average soil temperature, (c) daily average water table, (d) daily PPFD, and (e) average air CO2 concentration during daytime.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

Seasonal changes in major environmental conditions in the GM. (a) Daily average air temperature, (b) daily average soil temperature, (c) daily average water table, (d) daily PPFD, and (e) average air CO2 concentration during daytime.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Seasonal changes in major environmental conditions in the GM. (a) Daily average air temperature, (b) daily average soil temperature, (c) daily average water table, (d) daily PPFD, and (e) average air CO2 concentration during daytime.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
c. Estimation of above-ground biomass carbon of P. australis and other minor species





Allometric relationship of P. australis (a) between leaf biomass carbon per shoot and culm length and (b) between culm biomass carbon per shoot and culm length.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

Allometric relationship of P. australis (a) between leaf biomass carbon per shoot and culm length and (b) between culm biomass carbon per shoot and culm length.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Allometric relationship of P. australis (a) between leaf biomass carbon per shoot and culm length and (b) between culm biomass carbon per shoot and culm length.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
To estimate above-ground biomass carbon of the other underlayer species per unit ground area, we monthly set six 0.5 × 0.5 m2 quadrats in the wetland. All above-ground parts were harvested in the quadrats every month. The samples were oven dried (80°C, 72 h) and ground into powder, and then the total carbon content of the samples was analyzed (Sumigraph NC22F; Sumika Chemical Analysis Service, Tokyo, Japan). The above-ground biomass carbon of plants between observation dates was estimated by linear interpolation every day.
d. Estimation of hourly CO2 exchange rates by the CGEF
Air CO2 concentration in the GM fluctuated on a 1-day cycle, resulting from nighttime respiration and daytime photosynthesis. When the CO2 concentration increased past an upper set value (420 ppm), the CO2 scrubber was turned on. When it decreased below a lower set value (360 ppm), CO2 was supplied (Fig. 4a). Hourly CO2 exchange rates were calculated using the data collected every minute. With respect to the sign convention, we considered carbon gain by the ecosystem as positive and carbon loss to the atmosphere as negative.

(a) Daily change in air CO2 concentration in the GM on 20–21 May 2009. (b) Daily changes in hourly GPP, hourly NEP, and hourly ecosystem Re of the wetland ecosystem during the same period.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

(a) Daily change in air CO2 concentration in the GM on 20–21 May 2009. (b) Daily changes in hourly GPP, hourly NEP, and hourly ecosystem Re of the wetland ecosystem during the same period.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
(a) Daily change in air CO2 concentration in the GM on 20–21 May 2009. (b) Daily changes in hourly GPP, hourly NEP, and hourly ecosystem Re of the wetland ecosystem during the same period.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1















(a) Nonlinear regression line between hourly ecosystem respiration rate and average hourly air temperature in the GM. Nighttime data from April to November 2009 were used to calculate the regression. (b) Relationship between hourly ecosystem respiration rate and hourly PPFD above the vegetation height. Both daytime and nighttime data for the whole experimental year were used.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

(a) Nonlinear regression line between hourly ecosystem respiration rate and average hourly air temperature in the GM. Nighttime data from April to November 2009 were used to calculate the regression. (b) Relationship between hourly ecosystem respiration rate and hourly PPFD above the vegetation height. Both daytime and nighttime data for the whole experimental year were used.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
(a) Nonlinear regression line between hourly ecosystem respiration rate and average hourly air temperature in the GM. Nighttime data from April to November 2009 were used to calculate the regression. (b) Relationship between hourly ecosystem respiration rate and hourly PPFD above the vegetation height. Both daytime and nighttime data for the whole experimental year were used.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1



Rectangular hyperbolic response curves between hourly GPP and hourly PPFD from April to November 2009.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

Rectangular hyperbolic response curves between hourly GPP and hourly PPFD from April to November 2009.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Rectangular hyperbolic response curves between hourly GPP and hourly PPFD from April to November 2009.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
e. Gap filling of CO2 exchange rates
Unfortunately, data gaps are inevitable when constructing long data records. In our study, gaps were caused by an accidental disconnection of a signal cable, the disturbance in air CO2 concentration due to entry of researchers into the GM for measuring and sampling plants and soil, and facility maintenance. Falge et al. (2001) suggested three representative gap-filling methods, the mean diurnal variation method, the nonlinear regression analysis, and the lookup-tables method. In this study, the former two methods were applied for gap filling of data of CO2 exchange rates. The gap filling was performed separately for Re and NEP. Data were divided into two groups to fill gaps in the hourly Re: one was the growing season of above-ground plants (April–November) and the other was for the winter months (January–March and December). For the growing season, data gaps of a few to several hours were filled with hourly Re by Eq. (4). For the winter months, data gaps in hourly Re for both day and nighttime were filled by linear interpolation. Average hourly Re in December 2009 was used to fill the large gaps during the facility maintenance from 13 to 26 December 2009. To fill daytime NEP gaps, we used the relationship between NEP and PPFD expressed as Eq. (9) for each month.
In our study, the data gaps occurred during 26.8% of the experimental year. Other studies in the wild have reported data gaps of 39% and 52% during April and September in 1999 and 2000, respectively (Harazono et al. 2003); about 29% and 41% at two sites (Guo et al. 2009); 22.0%, 30.0%, and 17.4% at three sites (Yan et al. 2008); and about 44% and 46% at two sites (Yan et al. 2010). The lower ratio of gap filling at the CGEF was expected, as it was a controlled environment rather than a facility out in the wild.
3. Results and discussion
a. Effects of environmental conditions on the CO2 exchange rates
Temperature is often responsible for most of the variability in CO2 fluxes (Bridgham and Richardson 1992; Bubier et al. 2003; Marsh et al. 2005). In our study, nighttime Re increased exponentially with air temperature (r2 = 0.732; Fig. 5a), indicating a predictor of daytime Re. The coefficient of determination between nighttime Re and air temperature for 8 months together was higher than those for each month level. Because nighttime air temperature seldom reaches the maximum air temperature obtained during the daytime in fields, a prediction of daytime Re in the higher temperature region must be derived from the extrapolation by the eddy covariance technique. In contrast, our prediction of daytime Re did not depend on the extrapolation in the higher temperature region to make the regression because of the daily maximum air temperature being realizing by artificial warming during the nighttime. On the other hand, regressions were not successful for the relationship between hourly Re and hourly PPFD for the whole year (r2 = 0.096; Fig. 5b). Guo et al. (2009) reported a distinct relationship between fluxes and water table. On the contrary, Bonneville et al. (2008) reported no significant relationship between them. Also, Jones et al. (1999) found no correlation between the temperature in winter and CO2 flux. In our study, data gaps of hourly Re were filled by linear interpolation or the average value in December 2009 (winter period) because no distinct relationship during winter was observed between Re and environmental variables such as air and soil temperatures, PPFD, and the water table. There was also no distinct relationship between Re and water table from April to November. During winter in our study Re was relatively smaller than the plant growing season. Therefore, estimated Re errors because of gap filling would contribute less toward the annual Re.
Hourly GPP increased with hourly PPFD by a rectangular hyperbola function (Fig. 6). The values of both parameters (αGPP and GPPmax) for the function increased initially, reached a peak, and then decreased at the end of the growing season (Table 1). Some studies have reported that the variation in parameters among different growth periods may be caused by changes in plant characteristics such as physiological activity, leaf thickness, leaf area index, and environmental conditions (Bubier et al. 2003; Harazono et al. 2003; Zhao et al. 2006, 2009). The parameter GPPmax had a positively linear relationship with air temperature (r2 = 0.799). The regression curve for NEP was also obtained for each month (r2 varied from 0.161 to 0.637). Parameters for the function between hourly NEP and hourly PPFD showed similar trends with those for the GPP function. Hourly NEP increased with hourly gross primary productivity (r2 = 0.812; Fig. 7a). On the other hand, there was no distinct relationship between hourly NEP and Re (r2 = 0.005; Fig. 7b). This could be understood from the fact that NEP depended on both light and temperature, while Re depended only on temperature. Therefore, the ecosystem CO2 balance was strongly affected not by the output of CO2 by emission through plant and soil respiration but by its input by photosynthesis.
Nonlinear parameter estimates for rectangular hyperbolic response curves between hourly GPP and hourly PPFD.



Relationship between hourly NEP and (a) hourly GPP, and (b) hourly ecosystem Re of the wetland ecosystem in the GM.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

Relationship between hourly NEP and (a) hourly GPP, and (b) hourly ecosystem Re of the wetland ecosystem in the GM.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Relationship between hourly NEP and (a) hourly GPP, and (b) hourly ecosystem Re of the wetland ecosystem in the GM.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
b. Diurnal and seasonal patterns in CO2 exchange rates and above-ground plant biomass
Diurnal CO2 exchange rates showed distinct courses—that is, CO2 uptake during the daytime and CO2 release during the nighttime (Fig. 4b), although we showed data for only 2 days during the whole year. Hourly Re corresponded with temperature, and showed a peak around 12 h and had lower fluxes during the night. After sunrise, hourly GPP began to increase with PPFD and reached a peak at around 12 h. Then, GPP decreased in the afternoon and was zero during the night (Fig. 4b). Hourly NEP became negative (carbon source) in the early morning and evening as well as during the night, and then showed positive values (carbon sink) as PPFD increased sufficiently (Fig. 4b).
Daily CO2 exchange rates exhibited clear seasonal patterns corresponding to the environmental and plant conditions (Figs. 8a–c). Daily Re ranged from −0.06 to −3.58 g C m−2 day−1, increased from April to August, and then decreased from September to November (Fig. 8c). A small amount of CO2 emission was observed during the nongrowing season of plants. Cumulative Re was −53.7 and −437.9 g C m−2 during the nongrowing and growing seasons, respectively, and the emissions during the nongrowing season accounted for 10.9% of the annual emissions. Daily GPP ranged from 0 to 6.48 g C m−2 day−1 (Fig. 8a) with larger variations relative to Re because photosynthesis depended on light intensity as well as temperature (Fig. 6). GPP occurred from April to November. The peak value of daily GPP was observed around mid-August, which is the active period for vegetation. Plants emerged and the above-ground biomass of plants started to increase from early April, peaked in September, and mostly senesced by late November. The seasonal GPP trend coincided with the above-ground plant biomass. Daily NEP ranged from −1.10 to 3.34 g C m−2 day−1 (Fig. 8b) because of the balance between daily GPP and daily Re. The maximum daily NEP was observed in mid-August. NEP started to show positive values around late April to early May and negative values around late October to early November, indicating that the wetland switched from a net CO2 sink to a net CO2 source.

Seasonal changes in (a) daily GPP, (b) daily NEP, (c) daily ecosystem Re, and (d) above-ground plant biomass carbon of the wetland ecosystem in the GM. The above-ground plant biomass consists of leaf and culm of P. australis and leaf and stem of other underlayer species.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

Seasonal changes in (a) daily GPP, (b) daily NEP, (c) daily ecosystem Re, and (d) above-ground plant biomass carbon of the wetland ecosystem in the GM. The above-ground plant biomass consists of leaf and culm of P. australis and leaf and stem of other underlayer species.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Seasonal changes in (a) daily GPP, (b) daily NEP, (c) daily ecosystem Re, and (d) above-ground plant biomass carbon of the wetland ecosystem in the GM. The above-ground plant biomass consists of leaf and culm of P. australis and leaf and stem of other underlayer species.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Above-ground biomass carbon of P. australis per shoot was estimated by a power function (Figs. 3a,b). Using the regression curves, above-ground plant biomass carbon was evaluated nondisruptively for P. australis–dominated wetlands. Plant shoots started to grow from early April and had fully senesced by late November (Fig. 8d). Above-ground biomass of P. australis increased until early August and then remained relatively constant until senescence. Above-ground biomass of other species also showed a trend similar to that of P. australis. Total peak biomass carbon was 449.4 g C m−2 in mid-September (leaf and culm biomass carbon of P. australis and above-ground biomass carbon of other species were 146.2, 172.6, and 130.6 g C m−2, respectively; Fig. 8d). The daily CO2 exchange rates depended on above-ground plant biomass as well as environmental variables (r2 varied from 0.155 to 0.494; Fig. 9). Absolute values of daily GPP, NEP, and Re increased with above-ground plant biomass during development of the biomass. Furthermore, the values rapidly decreased while the plants continued to senesce. We found that the seasonal trend of daily CO2 exchange rates was affected by plant biomass more strongly at the senesced stage than the growing stage.

Relationship between above-ground plant biomass carbon and (a) daily GPP, (b) daily NEP, and (c) daily ecosystem Re of the wetland ecosystem in the GM. Circles and “×” indicate the data from 27 Apr to 18 Sep and from 19 Sep to 20 Nov, respectively.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1

Relationship between above-ground plant biomass carbon and (a) daily GPP, (b) daily NEP, and (c) daily ecosystem Re of the wetland ecosystem in the GM. Circles and “×” indicate the data from 27 Apr to 18 Sep and from 19 Sep to 20 Nov, respectively.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
Relationship between above-ground plant biomass carbon and (a) daily GPP, (b) daily NEP, and (c) daily ecosystem Re of the wetland ecosystem in the GM. Circles and “×” indicate the data from 27 Apr to 18 Sep and from 19 Sep to 20 Nov, respectively.
Citation: Journal of Hydrometeorology 13, 3; 10.1175/JHM-D-10-05033.1
c. Annual CO2 exchange rates and comparison with other studies
In our study, the accumulated daily NEP values provided an annual carbon budget of the P. australis–dominated ecosystem in the GM of 64.2 g C m−2 yr−1, which resulted from annual CO2 uptake of 555.8 g C m−2 yr−1 (annual GPP) and annual CO2 release of −491.6 g C m−2 yr−1 (annual Re). Thus, the wetland ecosystem behaved as a CO2 sink (Table 2). The errors in NEP, Re, and GPP were estimated as ±19.2, ±15.6, and ±17.0 g C m−2 yr−1 for a whole year, being ±16.7, ±12.5, and ±17.0 g C m−2 during 8 months for the growing season and ±9.4, ±9.4, and zero g C m−2 during 4 months for the winter period (Table 2). Contributions of the errors in ΔCO2,air, ΔCO2,scrubber, ΔCO2,injection, and Re and NEP by nonlinear regressions were 97.8, 1.0 × 10−3, 0, 2.2, and 0% to the total errors in the annual Re and 65.0, 6.8 × 10−4, 7.3 × 10−3, 0, and 35.0% to those in the annual NEP. The errors in ΔCO2,scrubber and ΔCO2,injection were considerably smaller than those in ΔCO2,air because CO2 was scrubbed or injected at nighttime or daytime, respectively, during only actively growing periods.
Comparison of this study with other studies on CO2 exchange rates of P. australis–dominated wetlands.


The CO2 exchange rates in our study were comparable with those in other studies conducted in P. australis–dominated wetlands using the eddy covariance technique and the combined method of internal gas pressures and flow measurements and harvesting (Table 2). The annual NEP in our study was consistent with that in P. australis–dominated wetlands at similar latitude in Shenyang, China (Zhou et al. 2009). On the other hand, the annual GPP in our study was 2.3-fold smaller than that in Shenyang. We considered the reasons for this. First, GPP positively depended on above-ground biomass (Fig. 9). In addition, the above-ground biomass in our study was 1.5-fold smaller than that in Shenyang (Table 2). Second, GPP increased with PPFD and attained a maximum value (GPPmax) (Fig. 6). Although there were no data on GPPmax in Shenyang, NEPmax values for all months there were higher than those in our study. In addition, monthly PPFD for the above-ground active period was higher in Shenyang (952 mol m−2 month−1) than that in our study (467 mol m−2 month−1). Thus, physiological aspects of P. australis and the light condition raised the GPP in Shenyang. Third, GPPmax had a positive linear relationship with air temperature (r2 = 0.799). Average air temperature for the above-ground active period was higher in Shenyang (17.9°C) than that in our study (14.2°C). Therefore, warmer temperature enhanced the GPP in Shenyang.
The annual Re was 2.4-fold smaller in our study than that in Shenyang (Table 2). As well, the soil respiration rate in the Vejlerne Reserve, Denmark (Brix et al. 2001), was comparable to the Re for the winter period in our study and in Shenyang because the above-ground shoots were senesced in those wetlands and Re was the same as the soil respiration rate for winter. The soil respiration rate for winter in our study was smaller than those rates in the Vejlerne Reserve and in Shenyang (Table 2). This respiration rate consists of below-ground autotrophic and heterotrophic respiration rates; therefore, we expected it to depend on below-ground biomass and soil organic carbon concentration. Soil organic carbon concentration in our study (2.34%) was similar to that in Shenyang (2.2%–2.5%). Therefore, the smaller below-ground biomass in our study (978 g C m−2) than in the other sites (Denmark: 3052 g C m−2; China: 1325 g C m−2) may result in lower soil respiration rate for winter, although there were no data on soil organic carbon concentration in the Vejlerne Reserve. We suggest that it is useful to investigate the above- and below-ground plant biomass and soil organic carbon concentration as well as climatic conditions for the comparison of CO2 exchange rates with other sites.
4. Conclusions
The annual CO2 exchange rates in our study were comparable with those of other wetland ecosystems obtained using the eddy covariance technique and the combined method of internal gas pressures and flow measurements and harvesting. The annual CO2 budget was found to be 64.2 ± 19.2 g C m−2 yr−1, indicating that the wetland ecosystem behaved as a CO2 sink for the entire year. The CO2 balance of P. australis–dominated wetland was strongly affected not by the output of CO2 through plant and soil respiration but by its input by photosynthesis. It is also important to investigate whether or not the wetland ecosystem will behave as a CO2 sink for a long period. Such an investigation is linked to clarification of the impact of wetland ecosystems on the global carbon budget of terrestrial ecosystems. For that purpose, multiyear studies are necessary to understand the temporal variations in carbon dynamics and feedback systems among various biotic and abiotic factors. The CGEF is very advantageous for studying the effects of temperature and atmospheric CO2 concentration on carbon dynamics at the ecosystem level because the facility is large and has the ability to produce the conditions similar to those induced by global warming. Furthermore, transfer model is essential to consider the carbon dynamics in an ecosystem. A mathematical compartment model consisting of photosynthesis and decomposition processes with nine reservoir compartments (i.e., three plant, two litter, three soil, and one groundwater compartments) was developed to estimate carbon dynamics in the wetland ecosystem (Suzuki et al. 2008). Data obtained in the CGEF in this study are highly valuable to determine the parameters in the compartment model because of less missing carbon and they will be helpful for other carbon dynamics studies in wetland ecosystems.
Acknowledgments
This research was conducted under contract with Aomori Prefectural Government, Japan. We thank Drs. K. Kitayama, K. Furuya, Y. Suzuki, Y. Kawasaki, T. Hirano, and K. Takagi for their advice and Drs. K. Nitta, M. Endo, and K. Koyama for their support. We also thank K. Nishidate, K. Kaga, T. Urasunai, S. Tanaka, Y. Hachinohe, M. Numasawa, H. Iwasaki, N. Ookubo, K. Orikasa, K. Sasaki, N. Kawabata, M. Edo, Y. Hunahasi, Y. Saito, and H. Iseya for their technical assistance.
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