1. Introduction
Accurate simulation of the turbulent flow field in the atmospheric boundary layer requires high resolution simulations as well as representation of the impacts of the large-scale features of the flow. One approach is to use coupled mesoscale and microscale simulations, which resolves a wide range of scales of atmospheric motion. Because of the large horizontal footprints of traditional mesoscale grid cells (horizontal grid spacing ~10 km), the effects of turbulence are parameterized in the vertical direction only [e.g., Mellor–Yamada–Nakanishi–Niino level 2.5 (MYNN; Nakanishi and Niino 2006) and Yonsei University (YSU; Hong et al. 2006) schemes] by assuming horizontal homogeneity. Along the horizontal direction, diffusion based on 2D Smagorinsky closure is applied to treat the turbulence. In contrast, for turbulence-resolving simulations (horizontal grid spacing
In coupled simulations, the terra incognita may appear in the cascade of the scales of motion and could impact the solution on nested microscale domains. In our previous work using a mesoscale model (Rai et al. 2017a), velocity time series for simulations using the MYNN boundary layer parameterization with the horizontal grid spacing in the terra incognita showed an unrealistic oscillatory behavior. Ching et al. (2014) also documented secondary structures in their simulation for subkilometer horizontal grid spacing. Several others have reported the impact of grid spacing in the terra incognita on their results. For example, Shin and Dudhia (2016) studied the terra incognita using different PBL schemes and found that none of the schemes are scale aware and superior to others. Similarly, Honnert et al. (2011) evaluated the subgrid and resolved portion of variables [e.g., turbulent kinetic energy (TKE), heat and moisture flux, etc.] at different subkilometer scales and found that the size of the structures of the velocity, temperature, and mixing ratio are different. Shin and Hong (2013) studied the resolved and parameterized vertical transport dependence on grid spacing in the terra incognita and found that the resolved TKE and vertical flux increases with the larger wind shear relative to the total TKE and fluxes for a given grid spacing. Zhou et al. (2014) studied the behavior of a single domain model (using both a PBL scheme and an LES model) in the terra incognita and pointed out physical and dynamical problems associated with the terra incognita. Efstathiou et al. (2016) used blending of the turbulence model and a bounding of vertical diffusion coefficient approach to study the impact of horizontal grid spacing on the mean profiles and TKE partitioning during the development of the boundary layer in the morning. Both blending of the turbulence model and a bounding approach showed weaknesses and strengths in improving the results. In recent year, Zhang et al. (2018) and Kurowski and Teixeira (2018) developed the scale-adaptive TKE closure to parameterize the turbulence across the grid resolutions—from large scale to microscale including the terra incognita. All of these studies focused on the model outputs, particularly, within the terra incognita, but they did not evaluate the impact of terra incognita on subsequent nested microscale domains.
Relatively few studies (e.g., Rai et al. 2017a; Muñoz-Esparza et al. 2017) have employed the one-way “online” coupling approach in Weather Research and Forecasting (WRF) Model framework (Skamarock et al. 2008) that combines both mesoscale and microscale domains. A large number of coupled simulations have used the one-way ‘offline’ coupling approach. For example, Talbot et al. (2012) used the WRF model to simulate hydrometeorological variables. Recently, Rodrigo et al. (2016) employed profiles of advection and temperature tendencies obtained from the WRF mesoscale domain to provide mesoscale information to an offline microscale simulation. These works accounted for the use of coupled simulations, but they did not account for the details of the impact of the terra incognita on their results.
The present work utilizes a suite of simulations using one-way online nested domains with horizontal resolution within the terra incognita to investigate the impact of the mesoscale boundary forcing on the microscale domain as diagnosed by the spectral energy of the resolved flow field. The results indicate that the amount of resolved turbulence and the structure of the turbulence simulated on the microscale domain primarily depends on the type of turbulence modeling used for the microscale domain itself and that the solutions are insensitive to the size of the horizontal grid spacing of the parent domain (i.e., mesoscale or within the terra incognita limit). Section 2 provides details of model configurations and physics options used for the simulations. In section 3, a brief description of the analysis tools, such as autospectral density function (ASDF) and proper orthogonal decomposition (POD), are presented. Section 4 presents a discussion of the results in terms of spectra, turbulence kinetic energy, and POD mode energy that are used to investigate turbulence properties of the simulation, followed by conclusions and summary in section 5.
2. Model configuration
A model configuration consisting of a parent domain (D01) and two sequentially embedded nests (D02 and D03) as shown in Fig. 1 were used for performing simulations using the WRF Model (version 3.7.1). Nested domains were used to downscale the horizontal grid spacing (

Model domains D01–D03 for the SWiFT site with elevation contour and state boundaries indicated. Note that there are two forms of domain configuration for domain D03—one for grid spacing 0.04 km and the other for grid spacing 0.24 km. The black dot in domain D03 shows the location of Texas Tech University tower at the SWiFT site.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Model domains D01–D03 for the SWiFT site with elevation contour and state boundaries indicated. Note that there are two forms of domain configuration for domain D03—one for grid spacing 0.04 km and the other for grid spacing 0.24 km. The black dot in domain D03 shows the location of Texas Tech University tower at the SWiFT site.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Model domains D01–D03 for the SWiFT site with elevation contour and state boundaries indicated. Note that there are two forms of domain configuration for domain D03—one for grid spacing 0.04 km and the other for grid spacing 0.24 km. The black dot in domain D03 shows the location of Texas Tech University tower at the SWiFT site.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
A number of simulations with horizontal grid spacing (
Grid configuration for simulations with varying horizontal grid spacing and boundary layer depth. Notations


The simulations for D01 use a PBL parameterization [e.g., MYNN 2.5-level (Nakanishi and Niino 2006) or YSU (Hong et al. 2006)] schemes to model turbulence for cases Ti1–Ti7. However, the two inner domains, D02 and D03 use either a standard PBL parameterization (e.g., MYNN or YSU) or three-dimensional subgrid parameterization [1.5-order TKE closure (Lilly 1967)] or the combination of both. Finer grid spacing can resolve more turbulence irrespective of the turbulence model. The grid spacing and type of turbulence model in the simulation are application specific. For instance, a cloud-resolving simulation [e.g., convective updraft (Fan et al. 2017)] uses relatively smaller grid spacing (
Data and schemes used in WRF Models.


3. Method of data analysis
A number of different second-order statistical moments (e.g., variance and TKE) were used to assess the behavior of the turbulent flow on the microscale domain when using a parent domain with grid spacing in the terra incognita. In this section, the methods for analysis of the turbulent flow, such as an ASDF and POD energy are described in detail.
a. Autospectral density function













b. Proper orthogonal decomposition









In the present work, we have applied the direct (i.e., classical) method of POD (Lumley 1967; Smith et al. 2005) to time series of vertical profiles of wind components to obtain the spatial POD modes
The value of λ decreases as the number of spatial modes increases. The number of eigenvalues needed to represent the kinetic energy per unit mass of the turbulent flow field depends on amount different coherent structures of different length and time scales in the turbulent flow field. In general, the original flow fields in our simulations can be reconstructed using the first few most energetic POD modes and coefficients. Herein, we use only the quantity λ to evaluate the energy in each spatial mode of different simulation cases studies simulated here.
4. Results and discussion
This section provides a detailed discussion of results obtained by applying the analysis tools described in section 3 to the simulated data. The observed data are also used to evaluate the simulated data using their POD mode energy. Model results are then discussed briefly in terms of variances, ASDF, and POD mode energy to verify the quality of the simulation. Results are discussed using a range of factors: boundary layer depth, horizontal grid spacing, grid refinement ratio, spinup distance, turbulence parameterization/modeling schemes, and number of nested domains.
a. Model evaluation
To obtain the simulated data, multiple nested domains were used that downscale the horizontal grid spacing
We analyze observed data to evaluate the simulated data in terms of velocity and POD spatial mode. The time–height contour plot constructed from the simulated and observed wind speed at SWiFT tower for the time period 1000–1200 CST (3 May 2014) is shown in Fig. 2. It should be noted that this figure is from a case in our previous study (Rai et al. 2017b) and is not listed in Table 1. More details on the model configurations and analyses of TKE and spectra for this data can be obtained from Rai et al. (2017b). In Fig. 2a, the first and second row (from the top) are a time–height plot of wind speed for the simulated and observed data (at 1-Hz frequency) for the first 0.2 km above the surface. The simulated data were obtained from the innermost domain (with

Comparison of (a) time–height contour of wind speed derived from (top) simulated data and (bottom) observed data and (b) POD energy of the first 18 spatial modes computed from 1-Hz observed and simulated data. Inset shows the cumulative POD energy for each spatial mode.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Comparison of (a) time–height contour of wind speed derived from (top) simulated data and (bottom) observed data and (b) POD energy of the first 18 spatial modes computed from 1-Hz observed and simulated data. Inset shows the cumulative POD energy for each spatial mode.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Comparison of (a) time–height contour of wind speed derived from (top) simulated data and (bottom) observed data and (b) POD energy of the first 18 spatial modes computed from 1-Hz observed and simulated data. Inset shows the cumulative POD energy for each spatial mode.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
b. Mesoscale limit
Simulations with horizontal grid spacing

Simulation results for (a) time–height contour constructed from the vertical profile of wind speed and (b) time series (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Simulation results for (a) time–height contour constructed from the vertical profile of wind speed and (b) time series (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Simulation results for (a) time–height contour constructed from the vertical profile of wind speed and (b) time series (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
The spectral representation of a given velocity component estimates the frequencies of the resolved turbulence structures. Figures 4a and 4b present the spectra of the u- and w-velocity components for simulations with varying

Autospectral density function for (a) u and (b) w component of velocities at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Autospectral density function for (a) u and (b) w component of velocities at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Autospectral density function for (a) u and (b) w component of velocities at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
POD energy derived from data at multiple locations of all velocity components may provide a better representation of energy contained in the turbulent flow than the analysis of spectral energy derived from data at single point. The POD energy for different spatial modes presented in this section was computed using time series of a vertical profile of three velocity components up to 5 km from the surface for the time period 1400–1700 CST using the method discussed in section 3. We have analyzed the simulated wind speed/direction, heat flux, and boundary layer depth for this 3-h time period. The statistics shows that the first- and second-order moments remain similar along horizontal direction during this time period. This shows that flow to be quasi-stationary and the POD can be used to analyze the simulated data. Figure 4c shows POD energy for the first 21 spatial modes for cases that use Myn- and Ysu-PBL schemes and
c. Terra incognita
As discussed in the previous section (see Fig. 3), the time–height contours of wind speed begin to show secondary structures for grid spacing
Contour plots of instantaneous velocity provide qualitative information regarding turbulence structures in the flow as well as the quality of the simulated flow field. Figure 5 depicts the contour plots of the w component of velocity extracted from the seventh model layer (i.e.,

Horizontal contours for instantaneous w-component velocity (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Horizontal contours for instantaneous w-component velocity (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Horizontal contours for instantaneous w-component velocity (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
As discussed previously, domain D02 in the terra incognita begins to resolve scales of motions that are smaller than the horizontal grid spacing

(a),(b),(d),(e) Autospectral density function derived for u- and w-component velocities at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

(a),(b),(d),(e) Autospectral density function derived for u- and w-component velocities at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
(a),(b),(d),(e) Autospectral density function derived for u- and w-component velocities at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Another way of evaluating the resolved turbulence in the simulated flow field is the use of POD analysis. The POD energy calculated for domain (i.e., D02) with grid spacing in the terra incognita for different cases (i.e., Ti1–Ti5) that use Myn- or Ysu-PBL schemes is presented in Fig. 6c. These results show that, for all cases, the POD energy in the first few modes (
d. Microscale limit
1) Flow visualization
The horizontal grid spacing of the intermediate domain (between mesoscale and microscale domains) may fall into the terra incognita and may produce secondary structures in the boundary layer. To study the effect of the terra incognita on microscale result, we analyzed the model output from the microscale domain (of two horizontal grid spacing 0.24- and 0.04-km cases) from the coupled simulation, where the microscale domain was forced by the parent domain with grid spacing within the terra incognita. Usually, on a microscale domain a three-dimensional model (e.g., Lilly model) is used to represent the effects of unresolved scales of motion on the resolved fields. Herein, in addition to the Lilly model, PBL schemes (i.e., Myn and Ysu) were used for modeling the turbulence in the microscale domain to examine the model output due to two different turbulence modeling approaches. Although PBL parameterization with grid spacing
Vertical and horizontal contour plots of wind speed help evaluate flow structures resulting from two different types of turbulence modeling—PBL schemes and the Lilly model. Figure 7a shows the x–y contour plots (i.e., horizontal slice) of an instantaneous w component of velocity at two instants of time (1500 and 1700 CST) obtained from the microscale domain with

Horizontal and vertical contour planes of the instantaneous w-component velocity at 1500 and 1700 CST for the horizontal grid spacings (a) 0.24 and (b) 0.04 km that use different turbulence parameterization and modeling schemes. The last column shows vertical slices of the middle case.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Horizontal and vertical contour planes of the instantaneous w-component velocity at 1500 and 1700 CST for the horizontal grid spacings (a) 0.24 and (b) 0.04 km that use different turbulence parameterization and modeling schemes. The last column shows vertical slices of the middle case.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Horizontal and vertical contour planes of the instantaneous w-component velocity at 1500 and 1700 CST for the horizontal grid spacings (a) 0.24 and (b) 0.04 km that use different turbulence parameterization and modeling schemes. The last column shows vertical slices of the middle case.
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
A microscale simulation with smaller horizontal grid spacing is expected to resolve more turbulence and reveal more details of the flow structure. Contour plots (in x–y and y–z planes) of the instantaneous w component of velocity for cases with
2) Spinup distance
The velocity contours of Fig. 7b (first column) showed that the turbulence for the southeasterly flow developed after a given distance from the upwind boundary of the domain and that the distance varied with the grid refinement ratio. To evaluate the resolved turbulence, spectra along five locations (i.e., L1–L5) with increasing distance from the inflow boundary (Fig. 8a) were calculated for the case with

(a) Five locations (i.e., L1–L5) along the north–south line from domain D03 for saving time series data; (b) autospectral density function at the five locations derived for u-component velocity (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

(a) Five locations (i.e., L1–L5) along the north–south line from domain D03 for saving time series data; (b) autospectral density function at the five locations derived for u-component velocity (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
(a) Five locations (i.e., L1–L5) along the north–south line from domain D03 for saving time series data; (b) autospectral density function at the five locations derived for u-component velocity (
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
3) TKE, 1D spectra, and POD
The variance of a variable provides an estimate of the amount of turbulence resolved in a simulated flow field. To calculate the profile of TKE for different cases, the sum of variances using the resolved flow field was computed at each vertical grid point using time series of the three components of velocity. Three TKE profiles were calculated using each 1-h time series data (i.e., 1400–1500 CST, etc.) and then averaged. The top two panels in Fig. 9a show the vertical profile for TKE for the cases with

(a),(d) Vertical profile of turbulent kinetic energy derived from the time series of three wind components; (b),(e) autospectral density function derived for the u-component velocity at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

(a),(d) Vertical profile of turbulent kinetic energy derived from the time series of three wind components; (b),(e) autospectral density function derived for the u-component velocity at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
(a),(d) Vertical profile of turbulent kinetic energy derived from the time series of three wind components; (b),(e) autospectral density function derived for the u-component velocity at
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
The spectral representation estimates the turbulence resolved of the simulated flow. Spectra of u and w component of velocity for the cases with
To estimate the amount of fluctuation of variables in the simulated flow using three velocity components at a number of locations, the POD energy of the first 21 spatial modes were calculated for the case with
The importance of using a coupled nested domain simulation rather than a single domain simulation for
4) 2D spectra
Flow structures in the microscale domain vary with the type of turbulence modeling schemes used in the parent domain (refer to Fig. 7). Between the flow structures simulated using the PBL schemes and the Lilly model, it is difficult to say which scheme or model produces more realistic flow structures. As discussed earlier for Lilly model case, the stability parameter

Two-dimensional spectra derived for u-component velocity from horizontal slices
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1

Two-dimensional spectra derived for u-component velocity from horizontal slices
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
Two-dimensional spectra derived for u-component velocity from horizontal slices
Citation: Monthly Weather Review 147, 3; 10.1175/MWR-D-18-0282.1
The two-dimensional spectra can also be used to analyze the impact of using a forcing domain within the terra incognita on the microscale output. The number of nested domains and the grid refinement ratios are different between the cases shown in Figs. 10a–d and 10e–h, although their inner domains have the same grid spacing
5. Summary and conclusions
A number of coupled mesoscale–microscale simulations with varying horizontal grid spacing falling into three limits—mesoscale, terra incognita, and microscale—were performed using the WRF modeling framework for a case with a convective atmospheric boundary layer. Combinations of two PBL parameterizations and a three-dimensional turbulence model were used for modeling turbulence on a nested domain. High-frequency model output of 3-h window split into three records was used to calculate the spectral energy density, POD energy, and TKE.
Our results grouped into different boundary layer heights
For a given horizontal grid spacing and turbulence model in the microscale domain, the results using the Myn scheme showed cellular-like structures in the wind speed 95 m above the surface, whereas results using the Lilly turbulence model showed elongated and streak-like structures along the mean wind direction. For the Lilly model case, the stability parameter (
The POD mode energy calculated from the vertical profile of three components of velocity for the microscale domain showed very similar amounts of energy in the first two spatial modes, irrespective to the types of turbulence modeling/schemes and the different domains. However, the POD energy at higher spatial modes was larger for the Lilly turbulence model compared to that from the Myn-PBL scheme case. The similarity of POD energy from the first two modes is associated with mesoscale features that were translated from the mesoscale domain to the microscale domain. However, the POD energy of the first few modes for the single domain simulation driven with NARR data showed lower energy compared to that from the nested domain simulation for a given grid spacing. These results clearly demonstrate the importance of coupling simulations in order to fully capture the mesoscale features in the simulated flow field. The behavior of model performance in the terra incognita for the complex terrain would be different than for the flat terrain, which needs to be investigated in the future.
Acknowledgments
This research was supported by the Office of Energy Efficiency and Renewable Energy of the U.S. Department of Energy as part of the Wind Energy Technologies Office. The Pacific Northwest National Laboratory is operated for the DOE by Battelle Memorial Institute under Contract DE-AC05-76RLO1830. JDM’s contribution was prepared by LLNL under Contract DE-AC52-07NA27344.
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