1. Introduction




Some insight into the nature of the eddy tracer flux can be obtained by considering a layered framework, in which instantaneous contours of b are taken as layer interfaces. In the continuous limit of infinitesimal layer thickness, this is the same as using b as the vertical coordinate.2 Taking b to be potential density3 then corresponds to using “isopycnal coordinates” (e.g., McDougall 1987). Because the interior oceanic flow is almost adiabatic (Wüst 1935), the diabatic forcing Q is expected to be small in the ocean interior and associated with weak diapycnal mixing. In the limit of vanishing instantaneous forcing Q, there is no instantaneous exchange of b across layers (isopycnals) and it is easy to see that in the isopycnally averaged budget for b there can be no cross-isopycnal flux. Furthermore, the mean forcing (related to Q) is controlling the cross-isopycnal flux in the mean budget of the layer thickness.
Returning to z coordinates, this property of the eddy fluxes is not as obvious. In fact, eddy tracer fluxes averaged at a constant height (instead of at constant b) usually show strong cross-isopycnal components even for the steady, weakly diabatic case, suggesting strong, apparently eddy-induced, diapycnal processes as we shall show below. On the other hand, z coordinates are convenient and simple to use for both analytical considerations and numerical calculations. In fact, an overwhelming number of analytical and numerical models are based on z coordinates, rather than either layered or isopycnal coordinates.
Therefore, it would be desirable if the character of eddy tracer fluxes as revealed above in the layered framework could be carried over to the mean tracer budget in z coordinates. Based on these considerations, we can formulate the following statement, which we would like to apply in quasi-steady4 conditions in z coordinates:
- (i) If there is no diabatic forcing Q locally in the instantaneous tracer budget [Eq. (1)], there should be also no diabatic effects locally in the mean budget [Eq. (3)]. As a consequence, the divergence of the eddy tracer flux
must be entirely expressible as a divergence of an advective flux of the mean tracer.
For nonzero Q, on the other hand, we expect there to be diabatic effects resulting from the eddies that are contained in the divergence of


Equation (5) therefore yields an integral constraint for averaging in z coordinates, similar to the previous one averaging in isopycnal coordinates. The difference is that the constraint in z coordinates holds only in a (weaker) integral sense while in isopycnal coordinates the constraint holds also locally. That means that statement (i) above, which was deduced from the isopycnal framework and applied to z coordinates, carries over the weaker integral constraint to a (stronger) local one in z coordinates.
The way we shall implement statement (i) in this paper is by taking account of rotational fluxes in an eddy flux decomposition into advective and diffusive parts, similar to the flux decompositions of Andrews and McIntyre (1978) and McDougall and McIntosh (1996). As examples of the performance of our eddy flux interpretation we diagnose numerical experiments, which are presented in section 2. In section 3, we review the classical flux decomposition by Andrews and McIntyre (1978), the transformed Eulerian mean (TEM) method, and diagnose it in the numerical experiments. Section 4 presents a TEM version, which was originally proposed by Gille and Davis (1999) and is equivalent to the effective diffusivity concept by Nakamura (2001). However, while all of these TEM versions are shown to be inconsistent with statement (i), in section 5 we discuss and apply to the model a consistent and satisfactory generalization of the eddy flux interpretations of Marshall and Shutts (1981), McDougall and McIntosh (1996), and Medvedev and Greatbatch (2004). The last section concludes and discusses the results.
2. Numerical simulations of eddy fluxes
We are diagnosing numerical experiments using an OGCM in several idealized configurations with respect to several eddy flux decompositions. The numerical code (the code and all configurations used in this study can be found online at http://www.ifm-geomar.de/spflame), which is used to integrate the OGCM, is based on a revised version of the Modular Ocean Model (MOM2; Pacanowski 1995) and formulated in z coordinates.
Experiment CHANNEL-3 is a setup with a reentrant channel on a β plane (referenced to the southernmost latitude of the model domain). Horizontal resolution is 1/3° and there are 20 levels of 100-m thickness. Initial conditions are a state of rest, constant meridional and vertical gradients in temperature (−1 × 10−5 K m−1 and 8.2 × 10−3 K m−1, respectively), and no zonal gradient (except for a small perturbation). A linear equation of state is used (∂ρ/∂T = −0.2 × 10−3 kg m−3 K−1), and salinity is set to a constant. The boundary conditions are no slip at the sidewalls, and vanishing heat fluxes at the sidewalls and surface and bottom boundaries. Bottom friction following a quadratic drag law is used with a coefficient of 1.5 × 10−3, lateral biharmonic friction is used with a viscosity of 2 × 1011 m4 s−1, and the Quicker advection scheme (Leonard 1979) is used for the tracer with no explicit diffusion. Explicit vertical viscosity is 2 × 10−4 m2 s−1. Temperature at the three northernmost and southernmost grid points is relaxed toward the initial condition, with a time scale ranging from 3 days at the boundary to 15 days at the outer edge of the relaxation zone.
Two further experiments are discussed in which we aim to reduce the interior diabatic forcing. Because we use no explicit diffusion in all model runs, the diabatic forcing outside the relaxation zones is due to implicit (numerical) diffusion by the advection scheme (Quicker) and other spurious numerical effects (Griffies et al. 2000; C. Eden and A. Oschlies 2006, unpublished manuscript). The most effective way to reduce these effects and correspondingly Q in the model is simply given by increasing the resolution. In experiment CHANNEL-6 (CHANNEL-12) the horizontal and vertical model resolution was increased by a factor of 2 (4). In addition, the biharmonic viscosity was decreased to 1 × 1011 m4 s−1 (2 × 1010 m4 s−1) and the temperature is relaxed toward the initial condition in 6 (12) of the southern- and northernmost grid points. All other aspects of the model are unchanged with respect to experiment CHANNEL-3.
After a couple of weeks of simulation time, baroclinic instability sets in and is producing large zonal deviations of the flow in the channel in all experiments. Figure 1 shows the fully developed stage of turbulence after 1-yr of integration in CHANNEL-3. In all experiments, the model is integrated for 40 yr and temporal and zonal averages are taken for the last 30 yr of the integration. In the following we relate b to temperature, that is, density, because temperature acts as the only (active) tracer in the model.
3. The classical eddy flux decomposition













Figure 2a shows the (residual) streamfunction for the total flow (
The residual streamfunction (Fig. 2a) shows rather strong cross-isopycnal flow in the interior of the channel. Consequently, the diffusivity K in TEM is rather large; Fig. 2d shows the diagnosed eddy-induced diffusivity (K) in TEM for experiment CHANNEL-3, with values of more than 100 cm2 s−1 at maximum in the interior of the channel. Note that K inside the restoring zones is greatly exceeding 100 cm2 s−1 and that K in TEM becomes negative in some interior regions.
Going to a higher resolution (and therefore less spurious diabatic forcing Q) changes the results only slightly. Figure 3a and Fig. 4a show the residual streamfunction in TEM in experiments CHANNEL-6 and CHANNEL-12, respectively, and Fig. 3d and Fig. 4d show the respective eddy-induced diffusivities K in TEM. There is still strong cross-isopycnal flow in the residual streamfunctions and considerably large values of K in the higher-resolution model configurations. Note that the regions in which K is negative remain more or less the same in all experiments and, if anything, show evidence of expanding into the interior.

4. Rotational eddy fluxes
a. Motivation






We will discuss here a choice for θ that was originally proposed by Gille and Davis (1999) (their Ψopt) and corresponds to the effective eddy diffusivity concept of Nakamura (2001). This modification of the classical TEM for diabatic flow is called hereafter TEM-D. The rotational gauge potential θ in TEM-D follows from a minimization of the eddy-induced diffusivity as outlined in appendix A. The difference between this and the classical TEM is that it is not the local diapycnal eddy flux F⊥, which determines K, but the averaged flux along an isopycnal, ∫s1s0 F⊥(s, n)ds. As seen in the integral budget [Eq. (5)], this integrated flux goes to zero for the adiabatic and quasi-steady case.
b. The adiabatic TEM

Although in principle mathematically valid, it is shown in appendix B that when applying TEM-A to diabatic flows, that is, with Q ≠ 0, the integrated cross-isopycnal eddy flux is redirected as a rotational flux through the boundary of the channel, which is a rather unphysical result. Only in quasi-steady, purely adiabatic conditions is the integrated cross-isopycnal eddy flux zero [Eq. (5)] and TEM-A an acceptable flux decomposition. In fact, TEM-A nicely demonstrates that setting K = 0 in quasi-steady flows is physically justified only for the (hypothetical) adiabatic case, that is, if Q = 0.
Clearly, in reality there is always diabatic forcing present and the numerical experiments discussed here certainly contain diabatic forcing. Therefore, TEM-A does not appear to be a reasonable eddy flux interpretation for our application. However, TEM-A remains a useful diagnostic tool to deduce the mean diabatic forcing


In TEM-A any cross-isopycnal (quasi steady) flow is entirely driven by
c. The diabatic TEM
Now we return to the TEM-D eddy flux interpretation, originally proposed by Gille and Davis (1999), which corresponds to the effective diffusivity concept of Nakamura (2001). Figure 2c shows the (residual) streamfunction for the total (meridional) flow (
There are strong rotational fluxes in the interior in all experiments (not shown). Note that in TEM-D the vertical rotational fluxes [−(∂/∂y)θ] are of the same magnitude as the advective fluxes [−B(∂/∂y)
TEM-D involves a nonlocal definition of the rotational gauge potential θ, which leads to an eddy-induced diffusivity that contains information throughout the channel about the strong diabatic forcing in the restoring zones near the northern and southern boundaries, even in regions in the interior that might be completely adiabatic. This is somehow an unsatisfactory result, also mentioned previously by Nurser and Lee (2004), and therefore we conclude that TEM-D is also an unsatisfactory eddy flux interpretation. In the next section, we will formulate another flux decomposition, which gives a more local definition of θ and the eddy-induced diffusivity in turn.
5. The temporal residual mean
Adding a rotational nondivergent part to the eddy tracer flux F does not effect the mean tracer budget. However, it does effect the eddy variance equation, offering an opportunity to interpret this part of the flux. This fact was used by McDougall and McIntosh (1996) to develop the temporal residual mean (TRM-I) extension to the TEM theory, and later the TRM-II version (McDougall and McIntosh 2001). We discuss here the more general and, in this context, simpler derivation, similar to what can be found in Greatbatch (2001) and Medvedev and Greatbatch (2004), and compare it with the above-presented flux decompositions.










Medvedev and Greatbatch (2004), in their version of the TRM, put θ2 to zero [a feature also of McDougall and McIntosh (1996), to whose approach Medvedev and Greatbatch (2004) is closely related; see below]. It is shown below that setting θ2 to zero is inconsistent with statement (i) for similar reasons as applied to the classical TEM discussed earlier. Analogous to the discussion of TEM-A and TEM-D, it is possible to define analogous TRM versions, namely, an “adiabatic” TRM (TRM-A hereinafter) and a “diabatic” TRM (TRM-D hereinafter). However, this route is not discussed in detail here; we just note the following features of such flux decompositions.
For TRM-A, all of the cross-isopycnal flux of variance is absorbed into a rotational flux, and K2 = 0, while for the TRM-D version we would get again an “isopycnally averaged” version of K2, that is, K2 = −|∇
On the other hand, it is also easy to see that setting θ2 = 0, as in the “TRM-M” version of Medvedev and Greatbatch (2004), K2 will be given by the divergence of the cross-isopycnal flux of variance, which is not guaranteed to be locally zero in the quasi-steady and adiabatic limit. Thus, from the variance budget [Eq. (23)] it follows that for TRM-M, K will also not necessarily be zero in the quasi-steady and adiabatic limit; that is, TRM-M is inconsistent with statement (i). It should also be noted that the difference between TRM-M and TRM-I (McDougall and McIntosh 1996) is given by assuming that in TRM-I
It is possible to extend the ideas of Greatbatch (2001) to the full hierarchy of moments that yields a generalized form of the TRM along the ideas of Marshall and Shutts (1981), McDougall and McIntosh (1996), and Greatbatch (2001) and avoids any nonlocal definition of the rotational gauge potential θ. This eddy flux decomposition is called the generalized temporal residual mean (TRM-G).














We see that K in TRM-G will be zero in the adiabatic and quasi-steady regime, and thus TRM-G is in accordance with statement (i). As a result, we have constructed a fully consistent flux decomposition based on the ideas of Marshall and Shutts (1981), McDougall and McIntosh (1996), and Greatbatch (2001), which can be evaluated for any stratification and to any order, and gives a locally defined eddy-induced diffusivity and eddy streamfunction. This is the main result of this paper.
Note that TEM-A, TEM-D, and TRM-G collapse into a single flux decomposition in the adiabatic case. It is also easy to see that the definition for the streamfunction B in TRM-G is identical to the classical TEM in the first term of the series in Eq. (31), and to TRM-M by Medvedev and Greatbatch (2004) in the first and second term. The same holds for K in Eq. (32) after substituting for θ from Eq. (32).
Figure 5 shows the eddy-induced diffusivity K in TRM-G, calculated in CHANNEL-6 with increasing orders in perturbation amplitude. For Fig. 5a K is evaluated to the first term in the series, that is, K|∇
Note that the diffusivity K evaluated to the second term (Fig. 5b) appears to be a reasonable approximation to the full form (excluding the regions of negative K). Because this K is almost identical to that given by the first term in (33), that is, K = −(∇
6. Summary and discussion
It was our aim, formulated in statement (i) in section 1, to represent the effect of eddy fluxes locally as a purely isopycnal flux in the adiabatic and quasi-steady case. It was shown that this is not guaranteed to be the case for the classical TEM formalism by Andrews and McIntyre (1978) and, as shown in numerical experiments, the implied eddy-induced diapycnal diffusion can become large with large changes of sign on a mean isopycnal. The experiments also show that this behavior does not reduce when going to higher resolutions, and thus less diabatic forcing. We have identified rotational eddy tracer fluxes as being responsible for this behavior.
Setting all diffusive eddy effects in the mean tracer budget to zero by introducing a nonlocally defined rotational flux in the eddy tracer fluxes yields for the (hypothetical) case of adiabatic flow only a reasonable eddy flux interpretation (thus called here TEM-A). Applying TEM-A to diabatic flows yields an unphysical cross-boundary rotational eddy tracer flux, demonstrating that implying zero eddy-induced diffusivity is physically unreasonable for diabatic flow regimes. On the other hand, the TEM-A proves to be useful as a diagnostic of the mean diabatic forcing in the numerical experiments, which is otherwise hard to estimate.
A consistent extension of the TEM-A to diabatic regimes is called TEM-D, which was originally proposed by Gille and Davis (1999) and corresponds to the effective diffusivity concept of Nakamura (2001). Here, minimal eddy-induced diapycnal diffusion shows up again in the mean tracer budget, which vanishes only in the adiabatic regime. This result points again toward the physical relevance of eddy-induced diapycnal mixing for diabatic flows. TEM-D collapses to TEM-A in the adiabatic, quasi-steady limit.
However, because the eddy-induced diffusivity in TEM-D is given by an average of the eddy tracer flux across a mean isopycnal, it can include information from strong nonlocal diabatic forcing, even in completely adiabatic regions. In our numerical channel experiments, the strong forcing inside the restoring zones gives rise to large diffusivities in the interior (note that they are positive definite in all experiments). We conclude that this feature of TEM-D [and the effective diffusivity by Nakamura (2001)] is a rather unsatisfactory result. Furthermore, such a nonlocal definition of the diffusivity and streamfunction might be difficult to parameterize.
The TEM versions consider first-order moments. In contrast, the TRM originally proposed by McDougall and McIntosh (1996) considers the eddy tracer variance equation to find gauge fluxes for the eddy tracer flux. We have generalized the concept and found that TRM-G, which collapses to TEM-A/D in the adiabatic limit, avoids any integral definitions of the rotational gauge fluxes. In contrast, the eddy streamfunction and the eddy-induced diffusivity in TRM-G are given by an infinite series involving fluxes of eddy tracer moments, because the flux decomposition was derived from an infinite hierarchy of budgets for tracer moments. Truncating the infinite series for the eddy-induced streamfunction and diffusivity in TRM-G after the first term gives the classical TEM, and truncating after the second term gives TRM-M by Medvedev and Greatbatch (2004) for which the special case |bz| ≫ |by| and
While TRM-M and TRM-I are not necessarily satisfying statement (i), for similar reasons as before for the classical TEM version, the new concept TRM-G is in agreement with statement (i) and can be evaluated for any stratification and to any order. It should also be noted that all arguments here carry over in a straightforward manner to three dimensions and temporal averaging, and can also be applied to isopycnal averaging to take account of rotational fluxes, for example, on an isopycnal surface.
We have formulated in statement (i) that there is no (local) diapycnal mixing by eddies unless there is some other (local) small-scale diapycnal forcing or mixing process at work. However, if there is such a small-scale diapycnal mixing, TRM-G quantifies to what extent mesoscale eddy activity is able to locally enhance (or reduce) this mixing, that is, how the large-scale mean quantities are affected by the small-scale mixing processes. TRM-G relates eddy-induced diapycnal diffusivity locally to
- either the growth or decay of mesoscale density variance and higher-order moments, and/or
- covariances between the small-scale forcing or mixing and density fluctuations.
The eddy-induced mixing effect is rather strong in our numerical model and might be overestimated, but we think that the traditional view that eddies are mixing completely adiabatically has to be revised, as proposed by Tandon and Garrett (1996) and recently by Radko and Marshall (2004). We note too that our formula for the eddy-induced diffusivity [Eq. (33)] suggests that the diffusivity can be expected to be large where the diapycnal forcing Q and its associated fluctuations Q′ are large, suggesting that the diffusivity is large in the surface mixed layer, but relatively small in the much more adiabatic ocean interior, an issue we explore elsewhere.
Because it is possible to extend the TRM-G theory to any tracer, the formalism thus relates, for the general case, a three-dimensional turbulent diffusivity to local changes and/or dissipation of tracer variance. Note that such a local relation in the tracer variance budget is also assumed and extensively used in homogeneous turbulence theory and several turbulence closures. Using TRM-G, it is possible to “localize” the variance budget also for the spatially inhomogeneous case.
We thank J. Willebrand, A. Oschlies, A. Medvedev, and S. Danilov for stimulating discussions. We also thank George Nurser, an anonymous reviewer, and the editor for helpful comments. The model integrations have been performed on a NEC-SX5 at the computing center at the University Kiel, Germany. RJG also thanks NSERC and CFCAS for financial support through an NSERC Research Grant and the Canadian CLIVAR Research Network.
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APPENDIX A
Minimal Cross-Isopycnal Eddy Fluxes







TEM-D approaches the classical TEM in the following limit. If the eddy tracer flux is entirely along contours of
APPENDIX B
Rotational Eddy Fluxes across Boundaries

To diagnose TEM-A in the numerical experiments, θ is calculated by interpolating F[y,
APPENDIX C
The Three-Dimensional TRM-G








Instantaneous temperature and velocity at 1000-m depth after 1 yr of integration in experiment CHANNEL-3. Every second velocity grid point is displayed, and the color shading ranges from 2° to 12°C.
Citation: Journal of Physical Oceanography 37, 5; 10.1175/JPO3050.1

(top) Streamfunction for the total flow in the (a) classical TEM (m2 s−1), (b) TEM-A, and (c) TEM-D in experiment CHANNEL-3. Contour interval is 1 m2 s−1. Also shown are contours of
Citation: Journal of Physical Oceanography 37, 5; 10.1175/JPO3050.1

Same as in Fig. 2, but for experiment CHANNEL-6.
Citation: Journal of Physical Oceanography 37, 5; 10.1175/JPO3050.1

Same as in Fig. 3, but for experiment CHANNEL-12.
Citation: Journal of Physical Oceanography 37, 5; 10.1175/JPO3050.1

Eddy-induced diffusivity K (cm2 s−1) in TRM-G calculated to (a) first, (b) second, (c) third, and (d) fourth order. Note that (a) is the same as K in TEM-G and (b) is the same as K in TEM-M.
Citation: Journal of Physical Oceanography 37, 5; 10.1175/JPO3050.1

Residual streamfunction (m2 s−1) in TRM-G calculated to (a) first, (b) second, (c) third, and (d) fourth order. Contour interval is 1 m2 s−1.
Citation: Journal of Physical Oceanography 37, 5; 10.1175/JPO3050.1
Note that the vectors
This is the case, assuming that b is a monotonic function of depth. See Nakamura (2001) and Nurser and Lee (2004) for a generalization of this approach for nonmonotonic functional forms of b.
Note that we assume for simplicity an equation of state in which both potential density and neutral density are the same.
We mean by quasi-steady state that (∂
Inside the restoring zones near the sidewalls of the channel, however, larger residuals of K in TEM-A show up for numerical reasons. Note that this artifact vanishes, when going to a higher resolution (as in experiment CHANNEL-6 and CHANNEL-12, discussed below). Note that for the TEM-D (see below) the same artifact shows up in CHANNEL-3 and vanishes as well in CHANNEL-6 and CHANNEL-12.
Note that all results presented here carry over to three dimensions, including the solution of the Euler–Lagrange equation.