1. Introduction
While the existing mixing relations, either stationary or transient, can be applied to classical estuaries with river runoff as the only freshwater forcing, they do not cover inverse estuaries since evaporation is neglected (MacCready et al. 2018; Burchard et al. 2019). Furthermore, tropical and subtropical estuaries can be a combination of inverse and classical estuaries (Valle-Levinson 2010). Strong evaporation may form so-called salt plugs, a region of maximum salinities greater than the ocean salinity inside the estuary (Wolanski 1986). For such estuaries, the freshwater forcing may change between seasons, i.e., the estuary may change from a classical estuary type during the wet season to an inverse type in dry season (Valle-Levinson and Bosley 2003).
Simply replacing the incoming river runoff Qr in (1) with the outgoing evaporation transport Qevap, Qevap < 0, would result in M < 0. For the exchange flow, this might make sense, as the inflowing water is transformed into more saline outflowing water which requires demixing of the inflowing water since no salt is added in the estuary. But M is by definition a strictly positive number. As we will show in this study, this problem is solved by adding a cross-surface salinity square transport proportional to the square of the surface salinity, ensuring M ≥ 0. Stern (1968) already states that salt variance added by surface fluxes has to be destructed on microscales due to molecular diffusion to achieve a steady-state solution for the World Ocean.
By this generalization of the Knudsen (1900) relations and the MacCready et al. (2018) mixing relation, not only estuaries may be characterized, but also bays, lagoons, and shallow coastal zones which are influenced by precipitation or evaporation. Furthermore, these relations provide a very good estimate of mixing by evaluating boundary transports without the need for a three-dimensional numerical model.
The paper is structured as follows: first, we derive the exact mixing relation including the cross-surface freshwater transport in section 2, as an extension to the relations presented in MacCready et al. (2018) and Burchard et al. (2019). We further simplify the exact relation by different assumptions that make it easier to apply. In section 3 we present a schematic box model explaining the new, simplified mixing relation for a strictly inverse estuary. In section 4 we present the application of the new mixing relations to idealized, two-dimensional estuary simulations, and the first application to a realistic, three-dimensional simulation, the Persian Gulf. In section 5 we discuss the results of this study and conclude.
2. Derivation of the mixing relations
a. Budget equations
1) Volume
2) Salinity
3) Salinity square
4) Salinity variance
b. Time averaging and reformulation in terms of TEF bulk values
c. Exact and approximated mixing relations
3. Simplistic box model
To exemplify the derived mixing relation (35) for an inverse estuary, we assume a box model as shown in Fig. 1 with Qr = δV = δS = 0. The steady-state estuary consisting of a surface layer (volume Vsurf with salinity ssurf) and a bottom layer (volume Vb with salinity sout) (see Fig. 1a) is maintained by the coaction of evaporation and inverse estuarine circulation during an infinitesimal time interval Δt. We describe the process of evaporation via Qsurf < 0 as spatially constant removal of freshwater from the saline surface volume. This freshwater loss increases the surface salinity from ssurf to

Descriptive box model of a steady-state, instantaneous process of an inverse estuarine circulation due to evaporation. (a) The two-layered box with two well-mixed layers, a surface and bottom layer with different salinities. (b) The freshwater volume, ΔtQsurf, Qsurf < 0, is removed from Vsurf, which reduces the volume of the surface layer to Vsurf + ΔtQsurf. The salt left behind by the evaporation process is mixed into the reduced surface volume, increasing the salinity ssurf to
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1

Descriptive box model of a steady-state, instantaneous process of an inverse estuarine circulation due to evaporation. (a) The two-layered box with two well-mixed layers, a surface and bottom layer with different salinities. (b) The freshwater volume, ΔtQsurf, Qsurf < 0, is removed from Vsurf, which reduces the volume of the surface layer to Vsurf + ΔtQsurf. The salt left behind by the evaporation process is mixed into the reduced surface volume, increasing the salinity ssurf to
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Descriptive box model of a steady-state, instantaneous process of an inverse estuarine circulation due to evaporation. (a) The two-layered box with two well-mixed layers, a surface and bottom layer with different salinities. (b) The freshwater volume, ΔtQsurf, Qsurf < 0, is removed from Vsurf, which reduces the volume of the surface layer to Vsurf + ΔtQsurf. The salt left behind by the evaporation process is mixed into the reduced surface volume, increasing the salinity ssurf to
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
4. Numerical model setups
To test the derived relations (32)–(35) in a numerical model, we employ a 2D model similar to the setup of Warner et al. (2005) and Burchard et al. (2019), and a realistic three-dimensional model of the Persian Gulf, also known as Arabian Gulf. The model of our choice is the General Estuarine Transport Model (GETM; Burchard and Bolding 2002), a coastal ocean model, solving the hydrostatic Boussinesq equations (Klingbeil et al. 2018). For turbulence closure, the turbulence module of the General Ocean Turbulence Model (GOTM; Burchard and Bolding 2001) is coupled to the model. Here, we use the κ–ϵ model in all simulations as well as the total variation diminishing (TVD) Superbee scheme (Pietrzak 1998) for the advection discretization. Further details on the different setups are described in the respective sections.
a. Calculation of mixing and in the model
In GETM all forms of variance changes are quantified in every grid cell according to the discrete variance decay analysis method of Klingbeil et al. (2014). This also includes the application of (43) to the single surface grid cells. The corresponding variance change defines the local contribution to
b. Idealized two-dimensional simulations
First, we applied the relations (32)–(35) to an idealized setup with different forcing. Furthermore, we investigated approximations of the surface salinity square transport, since the exact value is difficult to observe in high temporal and spatial resolution. The idealized estuary is 100 km long with a resolution of dx = dy = 200 m. The topography is linearly increasing from 15-m depth at the ocean boundary to 5-m depth where the river is entering the domain, see Fig. 2. In the vertical 60 equally distributed σ-coordinates are used. The open boundary is prescribed with a constant salinity of 30 g kg−1, and an M2 tidal amplitude of 0.5 m, if tides are applied. Freshwater transports that are river discharge as well as spatially integrated precipitation or evaporation, are all 5.0 m3 s−1. The TEF analysis is done during the model run for each baroclinic time step using 250 equidistant salinity bins from 0 to 40.0 g kg−1 as proposed by Lorenz et al. (2019). Depending on the experiment, see Table 1, different combinations of forcing are applied. The temperature is kept constant in these simulations. The different experiment simulations are integrated into a quasi-periodic state (500 tidal cycles), which is not a real periodic state due to waves forced by the surface flux gradients which propagate through the domain, flushing the high salinity water from the shallow part out of the estuary. Therefore, a long-term average of 100 tidal cycles is carried out to minimize the storage terms in the budget equations, see Fig. 2.

Idealized simulations: long-term average states of salinity distribution and residual circulation (w scaled with the local aspect ratio) averaged over 100 tidal cycles for different freshwater forcing: (a) evaporation prescribed over half the domain, (b) evaporation prescribed over one-third in the middle of the domain with river discharge, (c) evaporation over one-third in the middle of the domain with precipitation over the right third of the domain, (d) evaporation over one-third in the middle of the domain with precipitation over the right third of the domain plus additional river discharge; see Table 1 for more details. The dashed lines mark the transects that are evaluated to compute the mixing inside the estuary, i.e., right of the transect. The results of this evaluation are listed in Table 2.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1

Idealized simulations: long-term average states of salinity distribution and residual circulation (w scaled with the local aspect ratio) averaged over 100 tidal cycles for different freshwater forcing: (a) evaporation prescribed over half the domain, (b) evaporation prescribed over one-third in the middle of the domain with river discharge, (c) evaporation over one-third in the middle of the domain with precipitation over the right third of the domain, (d) evaporation over one-third in the middle of the domain with precipitation over the right third of the domain plus additional river discharge; see Table 1 for more details. The dashed lines mark the transects that are evaluated to compute the mixing inside the estuary, i.e., right of the transect. The results of this evaluation are listed in Table 2.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Idealized simulations: long-term average states of salinity distribution and residual circulation (w scaled with the local aspect ratio) averaged over 100 tidal cycles for different freshwater forcing: (a) evaporation prescribed over half the domain, (b) evaporation prescribed over one-third in the middle of the domain with river discharge, (c) evaporation over one-third in the middle of the domain with precipitation over the right third of the domain, (d) evaporation over one-third in the middle of the domain with precipitation over the right third of the domain plus additional river discharge; see Table 1 for more details. The dashed lines mark the transects that are evaluated to compute the mixing inside the estuary, i.e., right of the transect. The results of this evaluation are listed in Table 2.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Overview of four idealized model experiments of different combinations of freshwater forcing; Qevap and Qprecip are the area integrated evaporation and precipitation rates of E and P.


Experiment A (Table 1, Fig. 2a) demonstrates the bottom water formation solely due to evaporation, without any tides. Over the inner half of the domain, constant evaporation is prescribed. Due to the slope of the bathymetry, the salinity increases toward the shallow end and creates a baroclinic pressure gradient. Opposing a barotropic pressure gradient due to the lower surface at the coast is formed. The water of high salinities flows down the slope at the bottom, whereas the water of less salinity enters the evaporation zone, indicated by the arrows in Fig. 2a. As shown in Table 2,
Results of the mixing analysis for the idealized model experiments listing the variables needed to compute the mixing with relations (32)–(35). In the model mixing is directly diagnosed (


Experiment B adds river discharge, Qr = 5 m3 s−1, to experiment A, while also shifting the evaporation area further offshore and reducing the area from half the domain to one-third of the domain, keeping the freshwater loss to −5 m3 s−1. Furthermore, a semidiurnal M2 tide of 0.5 m is prescribed. The resulting salinity distribution, see Fig. 2b, shows a salinity maximum near the left border of the evaporation zone of ~37 g kg−1, a so-called salt plug which can be often found in tropical estuaries during dry season (Wolanski 1986; Valle-Levinson and Bosley 2003). In the salt plug, the mean velocity is downward. The circulation along the analyzed transect follows an inverse circulation. In addition, due to the river discharge, a classical estuarine circulation is created near the coast, extending into the evaporation zone. There the strong evaporation is able to transform the brackish water to higher salinities than the prescribed 30 g kg−1 at the open boundary. Compared to the first experiment the mixing is larger by a factor of ~20, although
Experiment C replaces the river discharge with a precipitation region in the coastal area, see Fig. 2c. The results show a similar salinity distribution to experiment B and the mixing is comparable as well. The major difference to experiment B is the numerical mixing that has more than doubled which can be explained by stronger salinity gradients since a thin surface layer of fresher water is maintained, see Fig. 2c. This strong salinity gradient is prone to be mixed due to numerical mixing.
Experiment D adds river discharge, yielding a net positive freshwater budget adding 5 m3 s−1 to the setup. The overall circulation follows a classical estuarine circulation with brackish water leaving the estuary at the surface, while saline water enters at the bottom, see Fig. 2d. The evaporation is not enough to form a salt plug as shown in experiments B and C. The surface salinity square transport
Comparison of sea surface salinity and


c. Realistic three-dimensional simulation
In this section we apply the mixing relations to a realistic model setup of a large, inverse estuary, the Persian Gulf, see Fig. 3.

Bathymetry and model domain of the Gulf: the shallow northwest and southern regions are bounded by a trench in the north, which is deepening toward the Strait of Hormuz. Outside the Strait of Hormuz, the depth increases to ~2000 m (note the logarithmic color scale). The blue line denotes the transect across the Strait of Hormuz where the exchange flow is analyzed.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1

Bathymetry and model domain of the Gulf: the shallow northwest and southern regions are bounded by a trench in the north, which is deepening toward the Strait of Hormuz. Outside the Strait of Hormuz, the depth increases to ~2000 m (note the logarithmic color scale). The blue line denotes the transect across the Strait of Hormuz where the exchange flow is analyzed.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Bathymetry and model domain of the Gulf: the shallow northwest and southern regions are bounded by a trench in the north, which is deepening toward the Strait of Hormuz. Outside the Strait of Hormuz, the depth increases to ~2000 m (note the logarithmic color scale). The blue line denotes the transect across the Strait of Hormuz where the exchange flow is analyzed.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
We repeated the model simulation of Lorenz et al. (2020) for the year 2011 which is a representative year of the exchange flow of the Persian Gulf. The difference between this simulation and the results of Lorenz et al. (2020) is an online TEF analysis as proposed by Lorenz et al. (2019) rather than an offline analysis of hourly output. We used 250 salinity bins from 0 to 50 g kg−1. The setup has a horizontal resolution of one nautical mile (1 n mi = 1.852 km) based on ETOPO1 (Amante and Eakins 2009), a vertical resolution of 40 vertically adaptive coordinates (Hofmeister et al. 2010, 2011; Gräwe et al. 2015). It is forced with hourly meteorological data from the NCEP Climate Forecast System version 2 (CFSv2; Saha et al. 2011), and uses 3-hourly HYCOM boundary conditions (Chassignet et al. 2007) with tides from the Oregon State University Tidal Prediction Software (OTPS; Egbert and Erofeeva 2002) (30-min resolution). For further details of the setup and the validation of the model, we refer to Lorenz et al. (2020).
The Persian Gulf is a semi-enclosed marginal sea with net freshwater loss due to evaporation. Its exchange flow is, therefore, following an inverse estuarine circulation. Although the evaporation is dominating the freshwater budget, there is an annual mean river discharge of ≈1600 m3 s−1 with the Shatt Al Arab as the major contributor with a mean discharge of 1400 m3 s−1. The circulation of the Gulf is strongly dependent on the seasonal cycle. In winter, the Gulf is well mixed in most parts due to strong surface cooling, evaporation, winds, and its shallowness (mean depth ≈ 40 m). In summer, the Gulf is stratified and a general counterclockwise circulation with large eddies (~100-km diameter) can be observed (Reynolds 1993; Kämpf and Sadrinasab 2006; Thoppil and Hogan 2010a; Yao and Johns 2010a; Pous et al. 2015). In contrast, in winter, the large eddies have dissipated and a lot of much smaller eddies (~10-km diameter) are occurring (Kämpf and Sadrinasab 2006; Yao and Johns 2010a; Pous et al. 2015).
The seasonality of the forcing translates into the salt mixing, see in Fig. 4, where the vertically integrated, monthly mean χs is shown (χs includes both physical and numerical contributions). Four persistent salt mixing hotspots can be identified: the western shelf of the Gulf of Oman, the Strait of Hormuz, the river plume of the Shatt Al Arab, and the shallow zone north of Bahrain and west of Qatar.

Monthly mean mixing map of the Gulf for 2011: color coded is the vertically integrated local salt mixing χs, see Eq. (12). The black contour shows the local surface salinity square flux in 10−6 (g kg−1)2 m s−1, see also Eq. (24). The blue line denotes the transect across the Strait of Hormuz where the exchange flow is analyzed.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1

Monthly mean mixing map of the Gulf for 2011: color coded is the vertically integrated local salt mixing χs, see Eq. (12). The black contour shows the local surface salinity square flux in 10−6 (g kg−1)2 m s−1, see also Eq. (24). The blue line denotes the transect across the Strait of Hormuz where the exchange flow is analyzed.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Monthly mean mixing map of the Gulf for 2011: color coded is the vertically integrated local salt mixing χs, see Eq. (12). The black contour shows the local surface salinity square flux in 10−6 (g kg−1)2 m s−1, see also Eq. (24). The blue line denotes the transect across the Strait of Hormuz where the exchange flow is analyzed.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
The western shelf of Oman is the region where the Persian Gulf water stratifies into the Indian Ocean in around 250-m depth. The Gulf water interacts with the steep topography and forms eddies of mesoscale to submesoscale size (L’Hégaret et al. 2015; Vic et al. 2015; Morvan et al. 2019). This process is not sufficiently resolved in the hydrostatic model (Klingbeil and Burchard 2013) and the mixing in our simulation is explained by numerical mixing due to internal pressure gradient errors within the terrain-following coordinates (Shchepetkin and McWilliams 2003).
The hotspot located in the Strait of Hormuz is where the exchange flow is occurring, see Fig. 5 for the mean salinity and mean velocity structure in summer and winter, respectively. The high mixing there is related to topographic features in the channel, strong tidal currents, and eddy activity (Swift and Bower 2003), which mix the saline outflowing water with the inflowing water. Along the Iranian coast in the Strait, there is only Indian Ocean water of almost constant salinity (see Fig. 5), which explains the low salt mixing values as there are only small salinity gradients. West of the Strait there is more mixing occurring in fall when the buoyancy loss due to the atmospheric forcing occurs. Almost all year there is a line of high mixing which is the front between the Iranian Coastal Jet of Indian Ocean Surface Water and the more saline Persian Gulf water (Kämpf and Sadrinasab 2006).

Monthly mean structure of salinity (color) and velocity (solid contours: eastward; dashed contours: westward) for (a) July and (b) December along the analyzed transect in the Strait of Hormuz, see Fig. 3 for the location: the interface between the outflowing, hypersaline water and the inflowing water is tilted due to Earth’s rotation. In July, when the vertical stratification is stronger, the tilting angle is smaller, whereas in December, when the stratification is weaker, the tilting angle is larger, causing the outflow to also occur near the surface at the southern coast.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1

Monthly mean structure of salinity (color) and velocity (solid contours: eastward; dashed contours: westward) for (a) July and (b) December along the analyzed transect in the Strait of Hormuz, see Fig. 3 for the location: the interface between the outflowing, hypersaline water and the inflowing water is tilted due to Earth’s rotation. In July, when the vertical stratification is stronger, the tilting angle is smaller, whereas in December, when the stratification is weaker, the tilting angle is larger, causing the outflow to also occur near the surface at the southern coast.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Monthly mean structure of salinity (color) and velocity (solid contours: eastward; dashed contours: westward) for (a) July and (b) December along the analyzed transect in the Strait of Hormuz, see Fig. 3 for the location: the interface between the outflowing, hypersaline water and the inflowing water is tilted due to Earth’s rotation. In July, when the vertical stratification is stronger, the tilting angle is smaller, whereas in December, when the stratification is weaker, the tilting angle is larger, causing the outflow to also occur near the surface at the southern coast.
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Two more mixing hotspots are located further inside the Gulf: the Shatt Al Arab river plume area and the area north of Bahrain and west of Qatar. The high mixing values are explained by the strong vertical salinity gradients in those regions. The fresh, thus buoyant water of the Shatt Al Arab stratifies over the saline Gulf water forming large vertical salinity gradients which are mixed, for example, by tidal currents. The vertical salinity gradients north of Bahrain are created by a dense gravity current flowing into the Gulf’s interior. Hypersaline water of salinities greater than 50 g kg−1 is formed in the shallow south of Bahrain, which stratifies below the adjacent Gulf water. Although dense water is formed in this region, it is negligible as a source of outflowing Persian Gulf Water (Lorenz et al. 2020).
Besides these persistent hotspots, seasonality can be observed also in other parts of the Gulf. The vertically integrated salt mixing is smaller in winter (JFM) and summer (JAS) than in spring (AMJ) and fall (OND). The explanation is found in the vertical structure of the Gulf: in winter most regions of the Gulf are well mixed, i.e., there are no salinity gradients to be mixed. In spring, stratification and the basinwide circulation start to form, which creates shear and therefore salt mixing. In summer, stratification is strongest, inhibiting vertical mixing. In fall the stratification is mixed away due to surface cooling, strong evaporation, and winds, reflected in the high local mixing values.
The surface salinity square transport is strongest in November and weakest in March, see contours in Fig. 4. From March onward the transport grows from the shallow coasts offshore until September, before it decreases again starting from the shallows. The shallow areas have higher surface salinities (Reynolds 1993; Kämpf and Sadrinasab 2006; Yao and Johns 2010a; Pous et al. 2015) which combined with the dry easterly to southeasterly winds cause this spatial distribution.
It is well known that the outflowing water is formed in late fall and winter in the northwest and southern shallows, which then propagates as a bottom current to the Strait of Hormuz (Reynolds 1993; Kämpf and Sadrinasab 2006; Yao and Johns 2010b; Pous et al. 2015; Lorenz et al. 2020). Lorenz et al. (2020) show that in late July/early August a regime shift in the outflowing water occurs. From February to August, most outflowing water in the Strait of Hormuz, except entrained surface waters, originated in the southern shallows in fall and winter. The propagation time is 2–3 months. From August onward most outflowing water was formed in the northwest during fall and winter, more than 6 months prior. During this time period, water from the southern shallows is not dense enough to become part of the bottom water (Yao and Johns 2010b). This shift in water masses is reflected in the increase of the salinity of the outflow in early August.
A time series for 2011 of the exchange flow properties across the transect in the Strait of Hormuz, see Fig. 3 for the location and Fig. 5 for the spatial structure of the exchange flow, reflects the described seasonality (see Fig. 6). The volume exchange is highly variable at time scale of a few days. On a weekly time scale, a spring–neap cycle can be observed, especially in the outflow. The inflow is near the surface and therefore affected more by winds. On seasonal time scales, we find that the volume exchange is stronger in the first half of the year, when the well-mixed state transitions into the stratified state, than the second half where increased vertical mixing weakens the exchange flow (Yao and Johns 2010b; Pous et al. 2015; Lorenz et al. 2020). The salinity of the inflow sin is ~37 g kg−1 whereas the salinity of the outflow follows the seasonal cycle described before (see Fig. 6b). The salinity of the outflow sout decreases from March to July since the salinity of the surface waters inside the Persian Gulf decreases during that time period (increasing salinity stratification inside the Gulf due to more inflow). On the dense water’s path from its origin to the transect, it is entrained with the less saline surface water. The increase of sout afterward is due to the arrival of dense winter water formed in the north (Lorenz et al. 2020). For this simulation, (s2)in,out ≈ (sin,out)2, and both are therefore not shown. The basin-averaged model surface salinity, Fig. 6b, shows a seasonal cycle with the lowest salinities in summer and highest in winter (Kämpf and Sadrinasab 2006). The surface salinity bulk value, ssurf defined in Eq. (36), is more variable than the model surface salinity and is highest in summer and lowest in winter, contrary to the model surface salinity. This is due to the weighting of the model surface salinity with the evaporation rate which is most of the year higher near the shallow coasts where the highest surface salinities are found.

Time series of the daily exchange flow and mixing quantities for 2011: (a) bulk volume transport values, (b) bulk salinities of the exchange flow and surface salinities, Eq. (36), and model salinity, (c) volume storage δV, (d) mixing computed from the exchange flow bulk values using relations (32) and (33), and physical, numerical mixing of the model, (e) surface freshwater transport Qsurf and surface salinity square transport
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1

Time series of the daily exchange flow and mixing quantities for 2011: (a) bulk volume transport values, (b) bulk salinities of the exchange flow and surface salinities, Eq. (36), and model salinity, (c) volume storage δV, (d) mixing computed from the exchange flow bulk values using relations (32) and (33), and physical, numerical mixing of the model, (e) surface freshwater transport Qsurf and surface salinity square transport
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
Time series of the daily exchange flow and mixing quantities for 2011: (a) bulk volume transport values, (b) bulk salinities of the exchange flow and surface salinities, Eq. (36), and model salinity, (c) volume storage δV, (d) mixing computed from the exchange flow bulk values using relations (32) and (33), and physical, numerical mixing of the model, (e) surface freshwater transport Qsurf and surface salinity square transport
Citation: Journal of Physical Oceanography 51, 4; 10.1175/JPO-D-20-0158.1
The described seasonality of the local salt mixing is visualized more clearly in the time series of the mixing Me, see Fig. 6d. For this simulation the constancy assumption (33) shows only a small error, since the graphs of the bulk salinities and bulk salinity squares show the same temporal evolution, proving that for this exchange flow
As a measure of stratification and to show its relation to mixing, we used the potential energy anomaly (PEA) Φ(Simpson et al. 1978) (see Fig. 6f). For a well-mixed state Φ = 0, whereas Φ > 0 indicates stratification. The high values of PEA (averaged over the Gulf) in Fig. 6f in summer and low values in winter indicate seasonal stratification. PEA further changes significantly on a biweekly time scale, which is visible more clearly for
On seasonal time scales the storage terms minimize and the seasonality of the exchange flow and the forcing is visible. The volume storage is orders of magnitude smaller than the freshwater forcing, see Table 4. The mixing is low from January to April, increases from May to July, decreases until October before reaching its maximum in November and December. This seasonal mixing cycle is modulated with the seasonal surface salinity square transport
Results of the mixing analysis for the whole Persian Gulf in 2011: all annual mean variables needed to compute the mixing with relations (32)–(35) are listed below.


5. Discussion and conclusions
In this study, we derived a mixing relation that is valid for all estuaries since it includes surface freshwater fluxes. Crucial to this relation is the newly introduced integrated surface salinity square transport due to precipitation and evaporation,
In general, the separate quantification of mixing due to river runoff and mixing due to cross-surface freshwater transports may help to advance the understanding of estuarine dynamics in future studies, e.g., when working with tropical estuaries, where the freshwater forcing may shift from wet to dry season (Wolanski 1986; Valle-Levinson and Bosley 2003) and with it the mixing contributions.
We have shown that for the Persian Gulf changes in freshwater forcing immediately modify the mixing M, i.e., evaporation events in Fig. 6g. Other sources of immediate changes in mixing could be discharge events (Lemagie and Lerczak 2020) and wind events (Lange et al. 2020). Some remaining open questions not only for the Persian Gulf but also for any estuary are the following: how do these spatial and temporal changes in mixing interact and change the circulation and salinity fields? When are these changes detectable in the properties of the exchange flow, e.g., sin and sout? We think that the presented mixing relations as well as tools like the direct analysis of salinity variance (Li et al. 2018; Warner et al. 2020), but also an isohaline mixing analysis (Burchard 2020; Burchard et al. 2021) are suitable tools to answer these questions.
Acknowledgments
The authors want to thank the two anonymous reviewers for their constructive feedback. This study was conducted within the framework of the Research Training Group “Baltic TRANSCOAST” funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)-GRK 2000 (www.baltic-transcoast.uni-rostock.de). This is Baltic TRANSCOAST publication GRK2000/0036. H.B. and K.K. were further supported by the Collaborative Research Centre TRR 181 on Energy Transfer in Atmosphere and Ocean funded by the German Research Foundation (project 274762653). The numerical simulations were performed with resources provided by the North-German Supercomputing Alliance (HLRN). Most of the analysis work was performed by computers financed by PROSO (FKZ: 03F0779A).
Data availability statement
The data of the annual Persian Gulf simulation can be found here: https://www.io-warnemuende.de/marvin-lorenz-publications.html. Please contact one of the authors if you are interested in the analysis scripts or the idealized simulations.
REFERENCES
Amante, C., and B. W. Eakins, 2009: ETOPO1 1 arc-minute global relief model: Procedures, data sources and analysis. NOAA Tech. Memo NESDIS NGDC-24, 19 pp., https://www.ngdc.noaa.gov/mgg/global/relief/ETOPO1/docs/ETOPO1.pdf.
Beron-Vera, F., J. Ochoa, and P. Ripa, 1999: A note on boundary conditions for salt and freshwater balances. Ocean Modell., 1, 111–118, https://doi.org/10.1016/S1463-5003(00)00003-2.
Burchard, H., 2020: A universal law of estuarine mixing. J. Phys. Oceanogr., 50, 81–93, https://doi.org/10.1175/JPO-D-19-0014.1.
Burchard, H., and K. Bolding, 2001: Comparative analysis of four second-moment turbulence closure models for the oceanic mixed layer. J. Phys. Oceanogr., 31, 1943–1968, https://doi.org/10.1175/1520-0485(2001)031<1943:CAOFSM>2.0.CO;2.
Burchard, H., and K. Bolding, 2002: GETM – A general estuarine transport model: Scientific documentation. European Commission Tech. Rep. EUR 20253 EN, 157 pp.
Burchard, H., and H. Rennau, 2008: Comparative quantification of physically and numerically induced mixing in ocean models. Ocean Modell., 20, 293–311, https://doi.org/10.1016/j.ocemod.2007.10.003.
Burchard, H., F. Janssen, K. Bolding, L. Umlauf, and H. Rennau, 2009: Model simulations of dense bottom currents in the western Baltic Sea. Cont. Shelf Res., 29, 205–220, https://doi.org/10.1016/j.csr.2007.09.010.
Burchard, H., and Coauthors, 2018: The Knudsen theorem and the total exchange flow analysis framework applied to the Baltic Sea. Prog. Oceanogr., 165, 268–286, https://doi.org/10.1016/j.pocean.2018.04.004.
Burchard, H., X. Lange, K. Klingbeil, and P. MacCready, 2019: Mixing estimates for estuaries. J. Phys. Oceanogr., 49, 631–648, https://doi.org/10.1175/JPO-D-18-0147.1.
Burchard, H., U. Graewe, K. Klingbeil, N. Koganti X. Lange, and M. Lorenz, 2021: Effective diahaline diffusivities in estuaries. J. Adv. Model. Earth Syst., 13, e2020MS002307, https://doi.org/10.1029/2020MS002307.
Campos, E. J., A. L. Gordon, B. Kjerfve, F. Vieira, and G. Cavalcante, 2020: Freshwater budget in the Persian (Arabian) Gulf and exchanges at the Strait of Hormuz. PLOS ONE, 15, e0233090, https://doi.org/10.1371/journal.pone.0233090.
Chassignet, E. P., H. E. Hurlburt, O. M. Smedstad, G. R. Halliwell, P. J. Hogan, A. J. Wallcraft, R. Baraille, and R. Bleck, 2007: The HYCOM (Hybrid Coordinate Ocean Model) data assimilative system. J. Mar. Syst., 65, 60–83, https://doi.org/10.1016/j.jmarsys.2005.09.016.
Egbert, G. D., and S. Y. Erofeeva, 2002: Efficient inverse modeling of barotropic ocean tides. J. Atmos. Oceanic Technol., 19, 183–204, https://doi.org/10.1175/1520-0426(2002)019<0183:EIMOBO>2.0.CO;2.
Gräwe, U., P. Holtermann, K. Klingbeil, and H. Burchard, 2015: Advantages of vertically adaptive coordinates in numerical models of stratified shelf seas. Ocean Modell., 92, 56–68, https://doi.org/10.1016/j.ocemod.2015.05.008.
Hofmeister, R., H. Burchard, and J.-M. Beckers, 2010: Non-uniform adaptive vertical grids for 3D numerical ocean models. Ocean Modell., 33, 70–86, https://doi.org/10.1016/j.ocemod.2009.12.003.
Hofmeister, R., J.-M. Beckers, and H. Burchard, 2011: Realistic modelling of the exceptional inflows into the central Baltic Sea in 2003 using terrain-following coordinates. Ocean Modell., 39, 233–247, https://doi.org/10.1016/j.ocemod.2011.04.007.
Ibrahim, H. D., P. Xue, and E. A. B. Eltahir, 2020: Multiple salinity equilibria and resilience of Persian/Arabian Gulf basin salinity to brine discharge. Front. Mar. Sci., 7, 573, https://doi.org/10.3389/fmars.2020.00573.
Kämpf, J., and M. Sadrinasab, 2006: The circulation of the Persian Gulf: A numerical study. Ocean Sci., 2, 27–41, https://doi.org/10.5194/os-2-27-2006.
Klingbeil, K., and H. Burchard, 2013: Implementation of a direct nonhydrostatic pressure gradient discretisation into a layered ocean model. Ocean Modell., 65, 64–77, https://doi.org/10.1016/j.ocemod.2013.02.002.
Klingbeil, K., M. Mohammadi-Aragh, U. Gräwe, and H. Burchard, 2014: Quantification of spurious dissipation and mixing–discrete variance decay in a finite-volume framework. Ocean Modell., 81, 49–64, https://doi.org/10.1016/j.ocemod.2014.06.001.
Klingbeil, K., F. Lemarié, L. Debreu, and H. Burchard, 2018: The numerics of hydrostatic structured-grid coastal ocean models: State of the art and future perspectives. Ocean Modell., 125, 80–105, https://doi.org/10.1016/j.ocemod.2018.01.007.
Klingbeil, K., J. Becherer, E. Schulz, H. E. de Swart, H. M. Schuttelaars, A. Valle-Levinson, and H. Burchard, 2019: Thickness-weighted averaging in tidal estuaries and the vertical distribution of the eulerian residual transport. J. Phys. Oceanogr., 49, 1809–1826, https://doi.org/10.1175/JPO-D-18-0083.1.
Knudsen, M., 1900: Ein hydrographischer Lehrsatz. Ann. Hydrogr. Marit. Meteor., 28, 316–320.
Lange, X., K. Klingbeil, and H. Burchard, 2020: Inversions of estuarine circulation are frequent in a weakly tidal estuary with variable wind forcing and seaward salinity fluctuations. J. Geophys. Res. Oceans, 125, e2019JC015789, https://doi.org/10.1029/2019JC015789.
Lemagie, E., and J. Lerczak, 2020: The evolution of a buoyant river plume in response to a pulse of high discharge from a small midlatitude river. J. Phys. Oceanogr., 50, 1915–1935, https://doi.org/10.1175/JPO-D-19-0127.1.
L’Hégaret, P., R. Duarte, X. Carton, C. Vic, D. Ciani, R. Baraille, and S. Corréard, 2015: Mesoscale variability in the Arabian Sea from HYCOM model results and observations: Impact on the Persian Gulf Water path. Ocean Sci., 11, 667–693, https://doi.org/10.5194/os-11-667-2015.
Li, X., W. R. Geyer, J. Zhu, and H. Wu, 2018: The transformation of salinity variance: A new approach to quantifying the influence of straining and mixing on estuarine stratification. J. Phys. Oceanogr., 48, 607–623, https://doi.org/10.1175/JPO-D-17-0189.1.
Lorenz, M., K. Klingbeil, P. MacCready, and H. Burchard, 2019: Numerical issues of the total exchange flow (TEF) analysis framework for quantifying estuarine circulation. Ocean Sci., 15, 601–614, https://doi.org/10.5194/os-15-601-2019.
Lorenz, M., K. Klingbeil, and H. Burchard, 2020: Numerical study of the exchange flow of the Persian Gulf using an extended total exchange flow analysis framework. J. Geophys. Res. Oceans, 125, e2019JC015527, https://doi.org/10.1029/2019JC015527.
MacCready, P., 2011: Calculating estuarine exchange flow using isohaline coordinates. J. Phys. Oceanogr., 41, 1116–1124, https://doi.org/10.1175/2011JPO4517.1.
MacCready, P., W. Rockwell Geyer, and H. Burchard, 2018: Estuarine exchange flow is related to mixing through the salinity variance budget. J. Phys. Oceanogr., 48, 1375–1384, https://doi.org/10.1175/JPO-D-17-0266.1.
Morvan, M., P. L’Hégaret, X. Carton, J. Gula, C. Vic, C. de Marez, M. Sokolovskiy, and K. Koshel, 2019: The life cycle of submesoscale eddies generated by topographic interactions. Ocean Sci., 15, 1531–1543, https://doi.org/10.5194/os-15-1531-2019.
Nash, J. D., and J. N. Moum, 2002: Microstructure estimates of turbulent salinity flux and the dissipation spectrum of salinity. J. Phys. Oceanogr., 32, 2312–2333, https://doi.org/10.1175/1520-0485(2002)032<2312:MEOTSF>2.0.CO;2.
Nurser, A. J. G., and S. M. Griffies, 2019: Relating the diffusive salt flux just below the ocean surface to boundary freshwater and salt fluxes. J. Phys. Oceanogr., 49, 2365–2376, https://doi.org/10.1175/JPO-D-19-0037.1.
Pietrzak, J., 1998: The use of TVD limiters for forward-in-time upstream-biased advection schemes in ocean modeling. Mon. Wea. Rev., 126, 812–830, https://doi.org/10.1175/1520-0493(1998)126<0812:TUOTLF>2.0.CO;2.
Pous, S., P. Lazure, and X. Carton, 2015: A model of the general circulation in the Persian Gulf and in the Strait of Hormuz: Intraseasonal to interannual variability. Cont. Shelf Res., 94, 55–70, https://doi.org/10.1016/j.csr.2014.12.008.
Reynolds, R. M., 1993: Physical oceanography of the Gulf, Strait of Hormuz, and the Gulf of Oman—Results from the Mt Mitchell expedition. Mar. Pollut. Bull., 27, 35–59, https://doi.org/10.1016/0025-326X(93)90007-7.
Saha, S., and Coauthors, 2011: NCEP Climate Forecast System Version 2 (CFSv2) selected hourly time-series products. National Center for Atmospheric Research, Computational and Information Systems Laboratory, accessed December 2017, https://doi.org/10.5065/D6N877VB.
Shchepetkin, A. F., and J. C. McWilliams, 2003: A method for computing horizontal pressure-gradient force in an oceanic model with a nonaligned vertical coordinate. J. Geophys. Res., 108, 3090, https://doi.org/10.1029/2001JC001047.
Simpson, J., C. Allen, and N. Morris, 1978: Fronts on the continental shelf. J. Geophys. Res., 83, 4607–4614, https://doi.org/10.1029/JC083iC09p04607.
Stern, M. E., 1968: T-S gradients on the micro-scale. Deep-Sea Res. Oceanogr. Abstr., 15, 245–250, https://doi.org/10.1016/0011-7471(68)90001-6.
Swift, S. A., and A. S. Bower, 2003: Formation and circulation of dense water in the Persian/Arabian Gulf. J. Geophys. Res., 108, 3004, https://doi.org/10.1029/2002JC001360.
Thoppil, P. G., and P. J. Hogan, 2009: On the mechanisms of episodic salinity outflow events in the Strait of Hormuz. J. Phys. Oceanogr., 39, 1340–1360, https://doi.org/10.1175/2008JPO3941.1.
Thoppil, P. G., and P. J. Hogan, 2010a: A modeling study of circulation and eddies in the Persian Gulf. J. Phys. Oceanogr., 40, 2122–2134, https://doi.org/10.1175/2010JPO4227.1.
Thoppil, P. G., and P. J. Hogan, 2010b: Persian Gulf response to a wintertime shamal wind event. Deep-Sea Res. I, 57, 946–955, https://doi.org/10.1016/j.dsr.2010.03.002.
Valle-Levinson, A., 2010: Definition and classification of estuaries. Contemporary Issues in Estuarine Physics, Cambridge University Press, 1–11, https://doi.org/10.1017/CBO9780511676567.002.
Valle-Levinson, A., and K. T. Bosley, 2003: Reversing circulation patterns in a tropical estuary. J. Geophys. Res., 108, 3331, https://doi.org/10.1029/2003JC001786.
Vic, C., G. Roullet, X. Capet, X. Carton, M. J. Molemaker, and J. Gula, 2015: Eddy-topography interactions and the fate of the Persian Gulf outflow. J. Geophys. Res. Oceans, 120, 6700–6717, https://doi.org/10.1002/2015JC011033.
Wang, T., W. R. Geyer, and P. MacCready, 2017: Total exchange flow, entrainment, and diffusive salt flux in estuaries. J. Phys. Oceanogr., 47, 1205–1220, https://doi.org/10.1175/JPO-D-16-0258.1.
Warner, J. C., W. R. Geyer, and J. A. Lerczak, 2005: Numerical modeling of an estuary: A comprehensive skill assessment. J. Geophys. Res., 110, C05001, https://doi.org/10.1029/2004JC002691.
Warner, J. C., W. R. Geyer, D. K. Ralston, and T. Kalra, 2020: Using tracer variance decay to quantify variability of salinity mixing in the Hudson River estuary. J. Geophys. Res. Oceans, 125, e2020JC016096, https://doi.org/10.1029/2020JC016096.
Warren, B. A., 2009: Note on the vertical velocity and diffusive salt flux induced by evaporation and precipitation. J. Phys. Oceanogr., 39, 2680–2682, https://doi.org/10.1175/2009JPO4069.1.
Wolanski, E., 1986: An evaporation-driven salinity maximum zone in Australian tropical estuaries. Estuarine Coastal Shelf Sci., 22, 415–424, https://doi.org/10.1016/0272-7714(86)90065-X.
Yao, F., and W. E. Johns, 2010a: A HYCOM modeling study of the Persian Gulf: 1. Model configurations and surface circulation. J. Geophys. Res., 115, C11017, https://doi.org/10.1029/2009JC005781.
Yao, F., and W. E. Johns, 2010b: A HYCOM modeling study of the Persian Gulf: 2. Formation and export of Persian Gulf water. J. Geophys. Res., 115, C11018, https://doi.org/10.1029/2009JC005788.