1. Introduction
Classical estuaries are coastal water bodies partially enclosed by land and subject to terrestrial freshwater runoff. The effect of salinity gradients dominates their density gradients. Therefore, it is helpful to analyze estuarine dynamics in an isohaline framework, using salinity coordinates instead of three-dimensional Cartesian coordinates. Such a procedure reduces the dimensionality of the problem and can lead to new insights that might be overlooked in the complexity of three-dimensional space. Moreover, it can provide a unified framework to classify and compare the wide variety of existing estuaries. It was Walin (1977) who first proposed such an isohaline analysis framework for estuaries, given the essentially nontidal Baltic Sea. This framework considers transports of volume and tracers for surfaces of constant salinity, the so-called isohalines. Between isohalines of different salinity, discrete isohaline volumes can be defined for which budgets of volume, tracers, and other properties such as mixing can be analyzed. Independently of Walin (1977), the application of the isohaline framework to tidal estuaries has first been proposed by MacCready and Geyer (2001), who characterized the tidally averaged motion of the isohalines as a competition between seaward advection with the mean flow and landward motion due to turbulent mixing. They concluded that the long-term averaged volume transport across an isohaline must equal the river runoff and the long-term averaged salt transport across an isohaline surface must be equal to the isohaline salinity times the river runoff. MacCready et al. (2002) extended this theory to allow isohalines to partially leave the estuary, which implies the definition of a seaward estuarine limit in the sense of an open boundary of a numerical model. In that framework, an estuarine volume is bounded by a fixed section toward the freshwater runoff, a fixed section toward the open ocean and a movable isohaline that may intersect with the open ocean section and the bottom of the estuary. This view of a truncated estuary had been extended by Hetland (2005), who included the entire river plume into the estuarine volume bounded toward the ocean by a moving isohaline.
Wang et al. (2017) showed that the long-term averaged diahaline volume transport is not evenly distributed over the two-dimensional isohaline surface as a seaward-oriented entrainment velocity. Instead, a distinct diahaline exchange flow exists with an upward (toward lower salinities) contribution in the up-estuarine region of the isohaline and a downward contribution in the seaward region. This can be seen from their Figs. 5 and 6. Indeed, after sufficiently long temporal averaging, the downward contribution needs to dominate since the isohaline area integral of the diahaline velocity must give the (seaward-oriented) river runoff Qr. This concept of a diahaline exchange flow can be contrasted to the framework of the total exchange flow (TEF) developed by MacCready (2011), who defines the time-averaged volume transports per salinity class in isohaline coordinates on fixed vertical transects across the estuary. By a separate integration over all incoming and outgoing volume fluxes per salinity class, the well-known Knudsen (1900) relations can be consistently reproduced (MacCready 2011; Burchard et al. 2018).
The quantification of salinity mixing as the (local) destruction of salinity variance per unit volume has been proposed by Burchard and Rennau (2008) and became a useful tool in analyzing estuarine dynamics (Burchard et al. 2009; Ralston et al. 2010, 2017; Wang et al. 2017; Wang and Geyer 2018; Li et al. 2018; Lange et al. 2020). In numerical models, the mixing analysis method proposed by Burchard and Rennau (2008) and later improved by Klingbeil et al. (2014) allows for the accurate separation of explicit mixing due to the parameterization of turbulence and implicit (or spurious) mixing due to numerical truncation errors of monotone tracer advection schemes. For an estuarine volume bounded toward the ocean using a fixed transect, MacCready et al. (2018) and Burchard et al. (2019) could link the estuarine circulation quantified by the Knudsen relations to the long-term mean volume-integrated salinity mixing M ≈ SinSoutQr, where Sin and Sout are representative inflow and outflow salinities, respectively. This theory was extended by Burchard (2020) for estuarine volumes bounded by a moving isohaline of salinity S, such that the volume-integrated mixing is exactly calculated as M = S2Qr (for long-term averaging and no air–sea exchange of freshwater). The mixing per salinity class is then obtained by differentiating this relation with respect to S, resulting in m = ∂SM = 2SQr which is the universal law of estuarine mixing postulated by Burchard (2020). As shown by Burchard et al. (2021), the mixing per salinity class equals twice the diahaline salt transport, a finding that quantitatively links salinity mixing to diahaline transport.
Most of the estuarine mixing and exchange flow studies have been carried out for idealized configurations (Hetland 2005; MacCready et al. 2018; Burchard et al. 2019; Burchard 2020; Burchard et al. 2021) or realistic estuaries with a fairly simple single-channel bathymetry such as the Hudson River Estuary (Wang et al. 2017; Wang and Geyer 2018), the Connecticut River Estuary (Ralston et al. 2017), or the small nontidal Warnow Estuary (Lange et al. 2020). Such low-complexity topographies simplify the analysis of estuarine mixing and exchange flow which largely resemble the predictions from models with idealized topographies. There is, however, a variety of more complex estuarine topographies, where mixing and exchange flow are spatially and temporal highly variable. Trivially, also for those nonstandard topographies, the fundamental estuarine relations (Knudsen relation, Knudsen mixing relation, universal law of estuarine mixing) must hold. Besides the temporal variability (e.g., spring–neap cycle) a major question for such estuaries is the spatial distribution of mixing and exchange flow and their correlation. An isohaline analysis of these processes would greatly help to understand the functioning of such complex estuarine systems.
Therefore, in the present study, we are analyzing the estuarine dynamics in the Pearl River Estuary (PRE, South China), a tropical estuary characterized by a complex multichannel river network leading to a highly distributed freshwater discharge. Furthermore, a large number of islands of various sizes is located in the region of strong salinity gradients where it impacts on local mixing. The central research question to be answered is the role of these topographic features in shaping the mixing and exchange flow. Still, we will focus on idealized scenarios representing two seasons, i.e., high runoff and upwelling favorable wind (summer season) and low runoff and downwelling-favorable wind (winter season).
Section 2 presents the mathematical derivation of the salinity mixing relations and the entrainment velocity using salinity coordinates. In section 3, we briefly introduce the study area and the numerical model adopted in this study. We present a detailed description of the spatial and temporal patterns of the salinity mixing and exchange flow in section 4. Finally in section 5, we draw our conclusions.
2. Theory
a. Mixing relation in an estuary bounded by isohalines
Here, we will derive the equation of estuarine mixing in a volume bounded by an isohaline surface, where we impose a temporal change of the water and the salt content within this estuarine volume.

(a) Volume-integrated budgets of water and salt within an estuarine volume V(S) (blue shading) bounded by an isohaline of salinity S (thick green line). The terms Q(S) and Fs(S) are the diahaline water transport and diahaline salt transport across this isohaline, respectively. On the isohaline surface, there are subareas (thick red line) with inward diahaline water transport Qin(S), and other subareas (thick blue line) with outward diahaline water transport Qout(S). At the river end of the estuary, runoff with salinity S = 0 and a rate of Qr is entering the volume. (b) The lower part of one single water column at location x with isohaline surfaces of salinity S at two adjacent time steps used in the derivation of the vertical projection of the entrainment velocity we. With
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

(a) Volume-integrated budgets of water and salt within an estuarine volume V(S) (blue shading) bounded by an isohaline of salinity S (thick green line). The terms Q(S) and Fs(S) are the diahaline water transport and diahaline salt transport across this isohaline, respectively. On the isohaline surface, there are subareas (thick red line) with inward diahaline water transport Qin(S), and other subareas (thick blue line) with outward diahaline water transport Qout(S). At the river end of the estuary, runoff with salinity S = 0 and a rate of Qr is entering the volume. (b) The lower part of one single water column at location x with isohaline surfaces of salinity S at two adjacent time steps used in the derivation of the vertical projection of the entrainment velocity we. With
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
(a) Volume-integrated budgets of water and salt within an estuarine volume V(S) (blue shading) bounded by an isohaline of salinity S (thick green line). The terms Q(S) and Fs(S) are the diahaline water transport and diahaline salt transport across this isohaline, respectively. On the isohaline surface, there are subareas (thick red line) with inward diahaline water transport Qin(S), and other subareas (thick blue line) with outward diahaline water transport Qout(S). At the river end of the estuary, runoff with salinity S = 0 and a rate of Qr is entering the volume. (b) The lower part of one single water column at location x with isohaline surfaces of salinity S at two adjacent time steps used in the derivation of the vertical projection of the entrainment velocity we. With
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
In (7), m∞ is the impact of freshwater transport from rivers, and
b. Water-column consideration
Apart from the temporal variation of salinity mixing, salinity mixing and diahaline transport also show high spatial variations on the isohaline surface.
3. Study area and methods
a. Pearl River Estuary
The Pearl River Estuary (PRE) is a multioutlet estuary located at the northern reach of the South China Sea (Figs. 2a,b). Freshwater from three main tributaries (West River, North River, and East River) passes through a highly complex river network and then discharges into the coastal ocean through eight outlets (short red lines in Fig. 2b). A large amount of freshwater, sediments, and nutrients are thus discharged to the northern shelf of the South China Sea, affecting the dynamics of the shelf and the various biogeochemical processes in the region (Harrison et al. 2008).

(a) Mesh grid over the model domain shown in every fifth grid line. (b) Bathymetry of the Pearl River Estuary. Short red lines indicate the location of the eight outlets of the PRE. (c) Enlarged view of the numerical grid inside the estuarine area, superimposed with the composite RGB image based on Landsat-8 satellite image collected on 18 Sep 2016 (downloaded from earthexplorer.usgs.gov). (d) Enlarged view of the numerical grid in the river network area.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

(a) Mesh grid over the model domain shown in every fifth grid line. (b) Bathymetry of the Pearl River Estuary. Short red lines indicate the location of the eight outlets of the PRE. (c) Enlarged view of the numerical grid inside the estuarine area, superimposed with the composite RGB image based on Landsat-8 satellite image collected on 18 Sep 2016 (downloaded from earthexplorer.usgs.gov). (d) Enlarged view of the numerical grid in the river network area.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
(a) Mesh grid over the model domain shown in every fifth grid line. (b) Bathymetry of the Pearl River Estuary. Short red lines indicate the location of the eight outlets of the PRE. (c) Enlarged view of the numerical grid inside the estuarine area, superimposed with the composite RGB image based on Landsat-8 satellite image collected on 18 Sep 2016 (downloaded from earthexplorer.usgs.gov). (d) Enlarged view of the numerical grid in the river network area.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
The river discharge shows substantial seasonal variations, with ∼80% of the river discharge occurring in the wet season (April–September). The total river discharge of all the tributaries reaches 20000 m3 s−1 in summer and drops to 4000 m3 s−1 in winter, roughly half of which enters the PRE (Dong et al. 2004). The wind in the PRE is dominated by two main patterns: northeasterly monsoon in winter and southwesterly monsoon in summer. The dynamics in the PRE exhibit a strong seasonal variation due to the large differences of runoff and wind direction between the wet season and the dry season (Dong et al. 2004). During summer, the plume is spreading cross shelf due to the upwelling-favorable wind as well as the high runoff (Pan et al. 2014). During winter, the plume is confined along the coast due to the downwelling-favorable wind and the low runoff (Lai et al. 2016). M2 and K1 are the two dominant tidal constituents in the PRE, making the PRE a mixed semidiurnal tidal regime (Mao et al. 2004). The tidal range is ∼1 m at the mouth of the PRE (near the red box in Fig. 2b) and is amplified to 1.7 m at the head of the PRE (near the green box in Fig. 2b). The observed water level at Makou station (for location, see Fig. 2a) shows that the tidal waves can progress far upstream into the river network (Lai et al. 2015). In the PRE, there are two deep zonal-oriented channels (the West Channel and the East Channel, see Fig. 2b), while the rest of the estuarine area consists of shoals and islands. In the shallow regions, the water depth varies from 2 to 10 m. Around the islands, the depth increases, reaching up to 30 or 40 m at the outer islands.
The presence of the islands disturbs the tidal flow and leads to the generation of strong horizontal density gradients in their vicinity. Additionally, vortex-like structures can emerge at the lee side of the islands. Such structures are a quite common feature in the PRE, as can be seen by available satellite images (Fig. 2c). Island wakes have been extensively studied due to the so-called island mass effect—the enhancement of biological productivity in the vicinity of the islands. Besides, island wakes play a crucial role in the cascade of mesoscale energy toward dissipation and turbulent mixing (Heywood et al. 1990; Hasegawa et al. 2004; Chang et al. 2013; Liu and Chang 2018; Chang et al. 2019). We observe a similar feature: an enhanced near-surface mixing
b. Model description and simulation setup
In this study, we performed the high-resolution simulations of the PRE using the General Estuarine and Transport Model (GETM; see Burchard and Bolding 2002). GETM is a coastal ocean model supporting curvilinear horizontal and vertically boundary-following coordinates. It has a nonlinear free surface with robust drying-and-flooding capability and an efficient subdomain decomposition for massively parallel computations on high performance computing (HPC) systems. More details and the governing equations can be found in Klingbeil and Burchard (2013) and Klingbeil et al. (2018).
A curvilinear grid with 918 cells along the estuary and 742 cells across the estuary (Fig. 2a) was constructed using the Delft3D grid generation tool (https://oss.deltares.nl/web/delft3d/get-started) and then applied to this study. One challenge of building a structured numerical grid for the PRE is to resolve the highly complex river network. Based on the analysis of model results from the unstructured-grid Finite-Volume Community Ocean Model (FVCOM) PRE circulation model, Lai et al. (2015) found that the amount of freshwater discharged through each of the eight outlets in the PRE is controlled by the upstream river runoff, the tidal energy entering the river network, and the complex water exchange at the intersections inside the river network. Therefore, it is crucial to resolve the geometry of the river network to reproduce the freshwater dynamics. In contrast to previous estuarine studies on salinity mixing (e.g., Burchard 2020; Burchard et al. 2021) that have used either idealized or low-complexity topographies, we use a realistic topography. This enables us to also investigate the potential effects of the deep channels and the multichannel river network on the spatial distribution of estuarine mixing. The model domain starts from the hydrologic stations (Gaoyao, Shijiao, and Boluo) of the three major tributaries, resolves the complex river network and the downstream estuaries, and then fans out to cover the shelf of northern South China Sea to the 4000-m isobath (Fig. 2a).
The horizontal resolution varies from 60 to 800 m in the river network (Fig. 2d), from 150 to 300 m inside the estuary (Fig. 2c), from 300 to 800 m in the coastal ocean area, and decreases to 9000 m at the southern open boundary. The horizontal grid size around the islands is approximately one-tenth of the scale of the eddies, suggesting the ability to resolve the eddies around the islands. In the vertical, we applied 40 terrain-following σ layers. Since the depth inside the PRE is mostly below 10 m, this vertical resolution is fine enough to resolve the vertical structure of the river plume. We used a baroclinic time step of 10 s and a barotropic time step of 1 s for the temporal discretization.
As stated above, the dynamics in the PRE exhibit a strong seasonal variation due to the large differences in runoff and wind direction between the wet and dry seasons. Therefore, we conducted two idealized forcing simulation scenarios: the summer simulation (high runoff) and the winter simulation (low runoff). The configurations of these two simulations differ only in the river discharge and the wind: the summer simulation has a total steady runoff of 15 600 m3 s−1 and a constant southwesterly wind of 5 m s−1. In contrast, the winter simulation has a total steady runoff of 3550 m3 s−1 and a constant northeasterly wind of 5 m s−1. These two different regimes are typical for their seasons (Mao et al. 2004). According to their climatological mean, we specified the runoff data at three hydrologic stations (Gaoyao, Shijiao, and Boluo) of the three major tributaries. In both simulations, the open ocean boundary conditions are driven by simplified tidal water level from the TPXO tidal datasets (Egbert and Erofeeva 2002), with only four harmonic constituents (M2, S2, K1, and O1) to reflect the spring–neap variation. Since density is mainly controlled by salinity in the estuarine region of the PRE, we neglected temperature in the model simulations. Although evaporation and precipitation have an impact on estuarine mixing (Lorenz et al. 2021), we do not consider the air–sea exchange of heat or freshwater. These simplifications help to bind the salinity variance of an estuarine volume to an isohaline surface enclosed by the river mouth and the open ocean. The initial sea surface elevation and currents are zeros, while the initial salinity distribution is from the GLBv0.08 dataset of the HYCOM global ocean forecasting results (www.hycom.org/data/glbv0pt08/expt-57pt2). Salinities at the open boundaries are set to 35 g kg−1. Both simulations were run for 12 months and started to exhibit a repeating spring–neap cycle after 5 months. To ensure the analysis of a quasi-steady state, we only analyzed the last month of the year-long simulation.
Vertical turbulent diffusion is calculated through the coupling with the turbulence module of the General Ocean Turbulence Model (GOTM; see Burchard and Bolding 2001) by solving the k–ϵ two-equation turbulence closure model. Horizontal turbulent diffusion is parameterized following Smagorinsky (1963) with a Smagorinsky constant of 0.28 and a turbulent Prandtl number of 2.0 for salinity. For advection of velocities and salinity, the TVD-Superbee scheme is employed in directional-split mode due to its minimal numerical mixing (Klingbeil et al. 2014). For the isohaline analysis, a discrete salinity increment of ΔS = 0.1 g kg−1 is adopted. The salinity binning is computed during each baroclinic time step of the model as proposed by Lorenz et al. (2019). Sensitivity tests show that the results are only weakly dependent on ΔS.
4. Results
We show the modeled surface salinity and surface current averaged over the spring tide as well as over the neap tide from both the summer (high runoff) simulation and the winter (low runoff) simulation in Fig. 3. In summer, the combination of the upwelling-favorable winds and the strong runoff induces a wide spreading of the river plume into a southeastward direction. In contrast, in winter, the plume turns southwestward along the coast with a narrower width under the control of the downwelling-favorable wind. The spatial distributions of the simulated salinity and current matches previous studies well, such as Pan et al. (2014) (for summer condition) and Lai et al. (2016) (for winter condition). During neap tide, accompanied by the weakened effect of tidal forcing, the surface plume extends more seaward than during spring tide, especially in winter. Inside the PRE, surface currents are stronger in the two deep channels than on the shoals. In summer, the deep channel westward of the Lantau Island (for location, see Fig. 3a) serves as an important passage for discharging water.

Horizontal distribution of surface salinity averaged over (a),(b) spring tide and (c),(d) neap tide from the high-runoff (summer) simulation and the low-runoff (winter) simulation, respectively. Surface current velocities greater than 0.1 m s−1 are shown in red arrows in every 20th grid point.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Horizontal distribution of surface salinity averaged over (a),(b) spring tide and (c),(d) neap tide from the high-runoff (summer) simulation and the low-runoff (winter) simulation, respectively. Surface current velocities greater than 0.1 m s−1 are shown in red arrows in every 20th grid point.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Horizontal distribution of surface salinity averaged over (a),(b) spring tide and (c),(d) neap tide from the high-runoff (summer) simulation and the low-runoff (winter) simulation, respectively. Surface current velocities greater than 0.1 m s−1 are shown in red arrows in every 20th grid point.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
a. Mixing
The analysis of mixing per salinity class shows that the universal law holds for both the high-runoff simulation and the low-runoff simulation when averaged over 14 days (Fig. 4). Due to the numerical discretization and the binning procedure for calculating properties per salinity class, the numerical representations of the relations (7) and (8) are not identical (e.g., Fig. 4a). However, both methods still closely follow the theoretical prediction of m(S) = 2SQr. Note here that for water with higher salinities (e.g., S > 22 g kg−1 in Fig. 4a), the mixing per salinity class m deviates from the theoretical linear curve since the isohaline volume interacts with the numerical open boundary.

Properties related to the salinity mixing and the diahaline transport as a function of salinity S calculated from long-term averaged model data from (left) the high-runoff simulation and (right) the low-runoff simulation, respectively. (a),(b) Total [red line, Eq. (8)], physical (green line), and numerical (blue line) mixing per salinity class m(S), in comparison to another method
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Properties related to the salinity mixing and the diahaline transport as a function of salinity S calculated from long-term averaged model data from (left) the high-runoff simulation and (right) the low-runoff simulation, respectively. (a),(b) Total [red line, Eq. (8)], physical (green line), and numerical (blue line) mixing per salinity class m(S), in comparison to another method
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Properties related to the salinity mixing and the diahaline transport as a function of salinity S calculated from long-term averaged model data from (left) the high-runoff simulation and (right) the low-runoff simulation, respectively. (a),(b) Total [red line, Eq. (8)], physical (green line), and numerical (blue line) mixing per salinity class m(S), in comparison to another method
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
For both simulations, the physical mixing mphy dominates the total mixing m, whereas the numerical mixing mnum contributes at most one-third of the total mixing. The higher contributions of the numerical mixing to the total mixing in summer could be related to the seaward spreading of the river plume pushed by the stronger runoff into the region with coarse resolution.
b. Diahaline exchange flow
When horizontally integrated over all locations where a given isohaline surface with salinity S occurs, Qout(S) and Qin(S) can be regarded as the exchange flow with respect to this isohaline surface. The magnitude of the outflow of the diahaline water transport Qout equals Qr for S = 0, while the magnitude of the inflow of the diahaline water transport Qin equals 0 for S = 0 (Figs. 4c,d). For S > 0 they both increase with salinity. Although the net diahaline water transport
c. Vertical distribution of diahaline exchange flow
To analyze the vertical distribution of diahaline exchange flow, the local diahaline water transport Q(x, y, S) calculated as (13) was mapped into σ coordinates with Δσ = 0.025 g kg−1 (Fig. 5). The mapping process from salinity space to σ space is presented in the appendix of this paper. For both seasons, the long-term averaged diahaline water transport Q is pointing to lower salinity in the bottom layers and pointing to higher salinity in the surface layers, which is very similar to the classical exchange flow. In general, the magnitude of the diahaline water transport inflow Qin is zero at the bottom (σ = −1), and then gradually increases to its maximum in the near-bottom layer, followed by the decrease to zero again at middle depth. Please note that we do not exactly have the bottom (σ = −1) value. Since there is no water transport through the bottom and Qin approaches zeros toward the bottom (e.g., σ ≤ −0.95), we set the bottom (σ = −1) values to zero. Influenced by the buoyant runoff, the outflow of diahaline water transport Qout generally is largest in surface layers and then decreases to zero at that middle depth. Because of the relations (9) and (18), the magnitudes of local mixing per salinity class mlo (or in other words, the diffusive diahaline salinity flux

Vertical distribution of the (negative) diahaline transport
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Vertical distribution of the (negative) diahaline transport
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Vertical distribution of the (negative) diahaline transport
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
d. Lateral distribution of mixing and entrainment
The spring–neap averaged spatial distributions of the mixing per salinity class and the entrainment velocity at S = 20 g kg−1 are presented in Fig. 6. The horizontal distribution of the salinity mixing on isohalines mlo(S) are similar to the horizontal distribution of the depth-averaged mixing χs presented in other studies (e.g., Warner et al. 2020). In this study, the S = 20 g kg−1 isohaline is a good representative among different isohaline surfaces to show the spatial distribution of salinity mixing. In Figs. 6a and 6b, areas with nonzero m are those where isohaline surface with S = 20 g kg−1 occurs during the spring–neap cycle. Comparing Fig. 6a and Fig. 6b, the isohaline with salinity S = 20 g kg−1 covers a much larger area in summer than in winter. The major difference occurs near the surface layers (e.g., −0.2 < σ < 0). As mentioned above, the size and shape of the river plume are mainly controlled by the river discharge and the wind field. The isohaline areas seaward of the σ = −0.2 iso-sigma contour are the part of the isohaline area which are very close to the sea surface. For salinity S = 20 g kg−1, this upper part of the isohaline surface spans in summer a major part of the isohaline area due to the combined effects of buoyancy and wind stress. In contrast, it only covers a minor part in winter.

Spatial distribution of (a),(b) local salinity mixing mlo(S) and (c),(d) diahaline velocity we(S) at S = 20 g kg−1 averaged over 14 days from (left) the high-runoff simulation and (right) the low-runoff simulation, respectively. Green contours represent the σ layer height, starting from σ = −0.8 (near bottom, lightest green) to σ = −0.2 (near surface, darkest green), with an interval of 0.2. Positive we means upward. The thick green line in (a) and (c) represents the transect studied in Fig. 7. The distance along the transect (not along the x axis) is shown in a dark red line, just for better comparison with Fig. 7.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Spatial distribution of (a),(b) local salinity mixing mlo(S) and (c),(d) diahaline velocity we(S) at S = 20 g kg−1 averaged over 14 days from (left) the high-runoff simulation and (right) the low-runoff simulation, respectively. Green contours represent the σ layer height, starting from σ = −0.8 (near bottom, lightest green) to σ = −0.2 (near surface, darkest green), with an interval of 0.2. Positive we means upward. The thick green line in (a) and (c) represents the transect studied in Fig. 7. The distance along the transect (not along the x axis) is shown in a dark red line, just for better comparison with Fig. 7.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Spatial distribution of (a),(b) local salinity mixing mlo(S) and (c),(d) diahaline velocity we(S) at S = 20 g kg−1 averaged over 14 days from (left) the high-runoff simulation and (right) the low-runoff simulation, respectively. Green contours represent the σ layer height, starting from σ = −0.8 (near bottom, lightest green) to σ = −0.2 (near surface, darkest green), with an interval of 0.2. Positive we means upward. The thick green line in (a) and (c) represents the transect studied in Fig. 7. The distance along the transect (not along the x axis) is shown in a dark red line, just for better comparison with Fig. 7.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
In summer, intensified salinity mixing occurs in the surface layers, seaward the Lantau Island and around many other small islands (Fig. 6a). As we have shown in Figs. 5a and 5b, the entrainment velocities are generally upward in the bottom layers and downward in the surface layers (Figs. 6c,d). However, there are also upward entrainment velocities in the surface layers in summer, mainly seaward of Lantau Island (Fig. 6c). In summer, the islands in the PRE play an essential role in controlling the salinity mixing and entrainment velocity (see Fig. 3 for the spreading of the plume). At the same time, in winter, the zones of intensification correspond more to the two deep channels. Negative we shows the areas where freshwater leaves the estuarine volume bounded by the isohaline surface. The patchy distribution of intensified we in summer suggests that the water exchange through an isohaline surface can be spatially highly variable.
e. Detailed view along a transect
We analyzed a vertically resolved transect to examine the vertical structure of the salinity mixing and the entrainment velocity in the PRE under high-runoff conditions. We placed it in the deep channel to the southwest of the Lantau Island (thick green line in Fig. 6a), oriented along the main direction of surface currents in summer (see Figs. 3a,c). The water along this transect is strongly stratified during the entire spring–neap cycle in summer, with a thin plume covering roughly the upper 3 m of the water column (Fig. 7a). In the context of the following analysis, the slope of the isohalines does not need to be considered for the distinction between we and udia, since the n ⋅ k in (9) can roughly be neglected here.

Vertical distribution of (a) salinity, (b) entrainment velocity (positive means upward), (c) mixing χs, and (d) local mixing per salinity class mlo along the transect shown in Fig. 6 averaged over 14 days from the high-runoff simulation. The thick green line in (a) represents the depth-averaged salinity
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Vertical distribution of (a) salinity, (b) entrainment velocity (positive means upward), (c) mixing χs, and (d) local mixing per salinity class mlo along the transect shown in Fig. 6 averaged over 14 days from the high-runoff simulation. The thick green line in (a) represents the depth-averaged salinity
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Vertical distribution of (a) salinity, (b) entrainment velocity (positive means upward), (c) mixing χs, and (d) local mixing per salinity class mlo along the transect shown in Fig. 6 averaged over 14 days from the high-runoff simulation. The thick green line in (a) represents the depth-averaged salinity
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
The relationship between entrainment velocity, salinity mixing, and diffusive salt flux can be inferred from Figs. 7b–d. For each single water column, saltwater from the bottom and freshwater from the surface are brought into the inner layers due to entrainment. Note that for each of the isohaline surfaces, there are both subareas with downward we and other subareas with upward we (see Fig. 5). The S = 20 g kg−1 isohaline roughly separates the downward and upward we, especially in the outer plume region (seaward of 22 km in Fig. 7b). However, in the near-surface region (σ > −0.2), this isohaline still crosses some nonzero regions of we, for example at 25 km along the transect. This explains the positive we for S = 20 to the southwest of Lantau Island in Fig. 6c.
According to (4), χs is equal mlo times the salinity gradient ∂nS. Equation (9) further shows that the local salinity mixing mlo is directly related to the diffusive salt flux
When averaged over a sufficiently long time, the diffusive salinity transport Fs through any isohaline surface must be balanced by the advective diahaline salinity transport SQ. However, due to the presence of the horizontal salinity flux divergence (the first two terms on the RHS of expression 16), the diffusive salt flux
f. Spring–neap and intratidal variations
Whereas the strong dependence of salinity mixing on the runoff in a steady state can be illustrated by the universal law of estuarine mixing, drastic variations of estuarine mixing can occur during a spring–neap cycle or even within single tidal cycles. To illustrate this, Fig. 8 shows the temporal variation of salinity mixing m (scaled by 2SQr such that the temporally averaged value should be unity) for salinities in the estuary within nine days from neap tide to spring tide. The resemblance between Figs. 8a and 8c as well as between Figs. 8b and 8d indicates that the results from the two methods [Eqs. (7) and (8)] calculating m are consistent. The salinity mixing m oscillates around its long-term averaged value m∞ = 2SQr throughout the flood–ebb tidal cycles. In the high-runoff simulation, the temporal variation of the normalized salinity mixing m/2SQr does not show distinct differences in magnitude and phase between different salinities (Figs. 8a,b). Therefore, the total mixing

Temporal variation of mixing per salinity class m calculated by two methods: (a),(b)
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Temporal variation of mixing per salinity class m calculated by two methods: (a),(b)
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Temporal variation of mixing per salinity class m calculated by two methods: (a),(b)
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
The spring–neap variation of the low-pass-filtered M shows that the estuarine mixing in the PRE is more vigorous during neap tide than during spring tide (Fig. 9a). The temporal oscillation of M in a flood–ebb tidal cycle can deviate by a factor of 2 from the steady-state theoretical value QrS2. The volume-integrated mixing M, the mixing per salinity class m, and the inflow Qin and outflow Qout of diahaline water transport are well in phase with each other (Figs. 9a,c,e). The isohaline is relatively flat during the neap tide, which leads to a larger isohaline area than during spring tide (Figs. 9g,h). As stated in MacCready and Geyer (2001), Hetland (2005), and Burchard (2020), reduced local mixing (e.g., when tidal forcing is weak) requires a larger isohaline surface to maintain the freshwater transport across the isohaline surface. Since m = 2SQr, high runoff Qr also results in an enhanced salinity mixing m, which require an increased isohaline area A (comparing Figs. 9g and 9h).

(a),(b) Time series of volume-integrated mixing M(S) (thin black line) and its theoretical value QrS2 under steady condition (dashed black line) from the high-runoff simulation (left) and low-runoff simulation (right), respectively. (c),(d) Time series of mixing per salinity class m(S) (thin black line) and its theoretical value 2SQr under steady condition (dashed black line). (e),(f) Time series of diahaline inflow Qin (red line) and diahaline outflow Qout (blue line). Note that the negative Qin is shown for better interpretation. (g),(h) Time series of diahaline area A(S) (thin black line). Thicker lines in all the panels represent the corresponding low-pass-filtered variables.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

(a),(b) Time series of volume-integrated mixing M(S) (thin black line) and its theoretical value QrS2 under steady condition (dashed black line) from the high-runoff simulation (left) and low-runoff simulation (right), respectively. (c),(d) Time series of mixing per salinity class m(S) (thin black line) and its theoretical value 2SQr under steady condition (dashed black line). (e),(f) Time series of diahaline inflow Qin (red line) and diahaline outflow Qout (blue line). Note that the negative Qin is shown for better interpretation. (g),(h) Time series of diahaline area A(S) (thin black line). Thicker lines in all the panels represent the corresponding low-pass-filtered variables.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
(a),(b) Time series of volume-integrated mixing M(S) (thin black line) and its theoretical value QrS2 under steady condition (dashed black line) from the high-runoff simulation (left) and low-runoff simulation (right), respectively. (c),(d) Time series of mixing per salinity class m(S) (thin black line) and its theoretical value 2SQr under steady condition (dashed black line). (e),(f) Time series of diahaline inflow Qin (red line) and diahaline outflow Qout (blue line). Note that the negative Qin is shown for better interpretation. (g),(h) Time series of diahaline area A(S) (thin black line). Thicker lines in all the panels represent the corresponding low-pass-filtered variables.
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
g. Impact of islands on mixing
As discussed above, during the high-runoff scenario, when the plume-influenced area extends further to the south (Figs. 3a,c), the spring–neap averaged surface mixing increases substantially around the islands (Fig. 6). To further examine the role of the islands on mixing, instantaneous fields of surface physical mixing

Instantaneous distribution of (a) horizontal gradient of surface velocity
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1

Instantaneous distribution of (a) horizontal gradient of surface velocity
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
Instantaneous distribution of (a) horizontal gradient of surface velocity
Citation: Journal of Physical Oceanography 52, 9; 10.1175/JPO-D-21-0292.1
5. Discussion and conclusions
When viewing an estuary in isohaline space, the mixing per salinity class m(S) equals twice the (negative) diahaline turbulent salinity transport Fs(S) through an isohaline S (Burchard et al. 2021). When averaged over a long period, this diffusive salinity transport Fs(S) has to be balanced by the advective salinity transport SQ through this isohaline surface (MacCready and Geyer 2001). Meanwhile, to maintain the volume conservation within this estuarine volume, the corresponding advective water transport Q must equal the upstream freshwater runoff Qr. These relations lead to the universal law of estuarine mixing m(S) = 2SQr for long-term averaged estuaries (Burchard 2020).
This paper focuses on the local relationship between the salinity mixing mlo, the diffusive salt flux
Salinity mixing and the exchange flow show substantial seasonal variations in the PRE. During summer, when the plume is more widespread due to the upwelling-favorable winds and the increased river discharge, the PRE plume extends further offshore, reaching the outer islands. In summer, intensified mixing occurs primarily in the surface layers and around the islands, while in winter, the intensification zones are shifted to the two deep channels. The distribution of the diahaline velocity along an isohaline surface indicates the areas where freshwater leaves the estuarine volume. The patchy distribution of intensified diahaline velocity in summer suggests that the water exchange through an isohaline surface can be spatially highly variable.
In summer, as the tides move the water back and forth, downstream disturbances or wakes arise in the vicinity of the islands, leading to a substantial increase of turbulent mixing in these regions. We found a high correlation between the patterns of surface mixing, island wakes, and pronounced horizontal gradients of velocity and density (salinity). This quantitative relation points to a potentially important role of submesoscale island wakes in the PRE. Oceanic island wakes (or topographic wakes in general) act as sites of submesoscale generation. Many complex dynamical processes can arise around the islands, such as vorticity generation, wake instability, coherent vortex formation, intense lateral and even diapycnal mixing for the case of centrifugal instability (Liu and Chang 2018). Those processes depend on numerous factors such as the water depth, the shape and size of the island, and the existence of a mean flow or tides (Hasegawa et al. 2004). Therefore, the submesoscale island wakes in the PRE and the plume fronts will be investigated separately in a subsequent study. There, we will use realistic simulations that include both the temperature field and a realistic atmospheric forcing. This is essential for a comprehensive analysis since the wind field is instrumental not just in the dynamics of submesoscale motions (Chrysagi et al. 2021) but also for the wake structures (Caldeira and Marchesiello 2002). However, for simplicity, we have neglected this explicit realism in the current study.
Apart from the impact of freshwater transport from rivers m∞ = 2SQr, the transient salinity mixing is also controlled by an unsteadiness term due to estuarine storage of salt and water volume
Acknowledgments.
XL and JW are supported by the National Natural Science Foundation of China (41906142, U1901209) and the Innovation Group Project of Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai, China) (311021004). KK, EC, and HB acknowledge the support by the German Research Foundation for the Collaborative Research Center TRR181 on Energy Transfers in Atmosphere and Ocean (Project 274762653). UG and ML are supported by the project ECAS-BALTIC funded by the German Federal Ministry of Education and Research (FKZ: 03F0860D). XL would like to thank the International Postdoctoral Exchange Fellowship Program for supporting his visit in IOW. The National Supercomputer Center in Guangzhou (China) is acknowledged for the computational resource of Tianhe-2. We thank Erika Henell (IOW) for constructive comments.
Data availability statement.
Data analyzed in this study were based on numerical model results. Datasets are available at http://doi.io-warnemuende.de/10.12754/data-2021-0008.
APPENDIX
Mapping from Salinity Space to σ Space
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