1. Introduction
Ocean tracers weakly diffuse across isopycnal surfaces, approximately surfaces of neutral density, away from boundaries. Global estimates of an appropriate “diapycnal” diffusivity Kd are approximately 10−5 m2 s−1 (Whalen et al. 2015; Munk 1966; Kunze 2017; Waterhouse et al. 2014), and the mixing is largely attributed to breaking internal waves (Gregg et al. 1996; MacKinnon et al. 2017). Investigators have inferred significant geographic variations in Kd that appear linked to bottom topography (Kunze et al. 2006) and wind patterns (Whalen et al. 2018; Alford et al. 2016). Where large-scale T or S gradients exist along isopycnal surfaces (“spiciness”), they can be efficiently stirred by the ocean’s mesoscale to form very sharp gradients, visible as along-isopycnal scatter on a T–S diagram, that are then destroyed by molecular diffusion (e.g., Smith and Ferrari 2009). For example, isopycnal maps of salinity S show the salty Mediterranean outflow spreading westward and southward through the northwest Atlantic at depths between approximately 800 and 1500 m (Fig. 1a). Enhanced middepth T–S scatter is visible in the σ2 = 36–36.8 kg m−3 range (Fig. 2) in Argo profiles collected at the location of the North Atlantic Tracer Release Experiment (NATRE; Ledwell et al. 1998; St. Laurent and Schmitt 1999; black box in Fig. 1). This along-isopycnal salinity gradient is compensated by an approximately equivalent along-isopycnal temperature T gradient such that α∇ρT = β∇ρS, where α is the thermal expansion coefficient, β is the haline contraction coefficient, and ∇ρ is the gradient evaluated on isopycnal surfaces. Lateral stirring and eventual mixing are one explanation for observations of compensated T–S fronts in the thermocline (e.g., Ferrari and Rudnick 2000), the other being double diffusion. Along-isopycnal surface diffusivities Ke are quite large, relative to Kd, with values in the range 500–3000 m2 s−1 (R. Abernathey et al. 2022a). Accurate representation of along-isopycnal stirring is necessary for accurate simulation of ocean tracers, including temperature and salinity, for climate simulations (Griffies et al. 1998). Uncertainties in the value of Ke are consequential for the simulation of anthropogenic heat uptake, El Niño, and the oxygen field in a coupled model (Gnanadesikan et al. 2015a,b, 2013).
Time-mean salinity on the σ2 = 36.33 kg m−3 surface averaged between years 2000 and 2017. The salinity gradient on an isopycnal must be compensated by an approximately equivalent temperature gradient. (a) The Argo climatology (2005–19), (b) POP 1/10° simulation, (c) POP 1° simulation, and (d) the ECCO state estimate. Black box marks the location of the NATRE.
Citation: Journal of Physical Oceanography 54, 5; 10.1175/JPO-D-23-0135.1
Conservative Temperature–Absolute Salinity diagram constructed using Argo profiles in the NATRE region (black box in Fig. 1).
Citation: Journal of Physical Oceanography 54, 5; 10.1175/JPO-D-23-0135.1
One way to frame the relationship between stirring and dissipation is through a budget for the tracer variance, e.g., T2. Such a budget expresses a relationship between the rate of variance production, through surface fluxes and stirring of larger-scale gradients by smaller-scale eddies (both mesoscale and microscale turbulence), and the rate of variance dissipation by molecular diffusion (χ; section 2a). When integrated over the global ocean and assuming equilibrium statistics, fluid flow must transfer variance from the scales at which variance is generated to the molecular scales at which variance is dissipated, and the rates of generation, transformation, and dissipation must match. Oceanic models cannot resolve fluid flow down to molecular scales and must approximately represent the transformation of variance using parameterizations that model the variance production term using an “eddy diffusivity” concept. Along-isopycnal stirring is commonly represented by an along-isopycnal diffusivity (Redi 1982), and diapycnal or approximately vertical stirring is represented by a vertical mixing scheme (Large et al. 1994; Jackson et al. 2008; Reichl and Hallberg 2018; Umlauf and Burchard 2003). Observational estimates of these diffusivities, both Ke and Kd, have been derived using many techniques. Here, we work with ocean microstructure observations that can be used to infer Kd from an estimate of the rate of dissipation of temperature variance χ or the rate of kinetic energy dissipation ϵ (Osborn and Cox 1972; Gargett 1989; Gregg 1987; Osborn 1980). Microstructure χ estimates are inferred from observations of the last stages of temperature variance transformation in the ocean. Assuming equilibrium and fidelity, these χ estimates must be related to stirring processes that are parameterized in ocean models. In this paper, we explore interpreting variance pathways and associated parameterizations in a few models, both mesoscale-permitting and mesoscale-parameterizing, in relation to a microstructure dataset collected during the NATRE (Ledwell et al. 1998; St. Laurent and Schmitt 1999), drawing heavily on the analysis by Ferrari and Polzin (2005).
2. Framework
a. Tracer variance pathways
Equation (4), derived from that for mesoscale variance
Schematic of approximate tracer variance pathways. Red crosses over dashed lines mark unresolved pathways that are parameterized. Colors match terms presented in Fig. 4. (a) Hypothesis from Garrett (2001). (b) Analysis framework of Ferrari and Polzin (2005) based on (a), but with colors matching terms in Fig. 4a. (c) For POP 1/10° simulation. The model resolves the mean → mesoscale pathway but the rest is parameterized through either KPP vertical mixing or biharmonic lateral diffusion. Terms from Guo et al. (2022) are rewritten in our notation. (d) For the POP 1° and ECCO simulations. These do not resolve the mesoscale, so all pathways are parameterized.
Citation: Journal of Physical Oceanography 54, 5; 10.1175/JPO-D-23-0135.1
b. Variance pathways as a model diagnostic
A large number of approximations are required to get to this point, namely, those of homogeneity, stationarity, a priori ignoring of the triple correlation term, and an assumption that we are working in a region away from external sources and sinks of variance. However, this framework has value in qualitatively describing the nature of variance cascades in the ocean (Garrett 2001; Ferrari and Polzin 2005; Spingys et al. 2021; Naveira Garabato et al. 2016). Specifically, Ferrari and Polzin (2005), Spingys et al. (2021), and Naveira Garabato et al. (2016) estimate the rhs term 〈χ〉/2 and the first term on the lhs
c. Objectives
The central question of this paper is whether the estimated mesoscale stirring term in a mesoscale-resolving model and the parameterized variance dissipated by Redi (1982) diffusion in coarser models compare well against the estimated magnitude of the scale transformation term using the NATRE observations and the Ferrari and Polzin (2005) methodology. We compare resolved and parameterized mesoscale eddy stirring to an observational estimate using the variance production rate χe as a metric. This rate is a direct output of the lateral diffusivity scheme, so the comparison is direct in the sense of Large and Gent (1999). We choose χe as our metric instead of an eddy diffusivity Ke to avoid further uncertainties associated with defining the mean gradient
The analysis presented here is novel in that it compares realistic primitive equation ocean models used in climate projection and prediction configurations with realistic forcing to microstructure-based inferences about variance pathways in the ocean. In this way, it differs from the work of Smith and Ferrari (2009) who used a 1-km quasigeostrophic model to support the interpretation that mesoscale eddy stirring is the major contributor to the scale transformation term in the NATRE region.
3. Datasets
a. NATRE microstructure dataset
The core microstructure dataset used in this analysis is that from the NATRE (Ledwell et al. 1998; St. Laurent and Schmitt 1999), collected in April 1992 using the Woods Hole Oceanographic Institution High Resolution Profiler (HRP; Schmit et al. 1988). We use vertical profiles from the “large scale survey”: approximately 100 profiles down to 2000 dbar collected in a 400 km × 400 km box (24°–28°N; 26.5°–31°W) as a 10 × 10 grid at approximately 0.5° (44.4 km) spacing. These profiles contain quality-controlled estimates of temperature, salinity, dissipation rate of temperature variance χ, and dissipation rate of turbulence kinetic energy ϵ at 0.5-dbar spacing. The dataset is available publicly in the National Science Foundation microstructure database1 (Waterhouse et al. 2014).
b. Observational estimates of Ke
Groeskamp et al. (2020b) estimate Ke by specifying Ue as the root-mean-square of the geostrophic velocity
c. Simulations
We interpret the fidelity of the mesoscale stirring representation in a suite of global model integrations described below, using the NATRE observations.
1) CESM-H POP 1/10°
Guo et al. (2022) present a closed temperature variance budget analysis for an interannually forced simulation using the Parallel Ocean Program version 2 (POP2; Smith et al. 2010) component of the Community Earth System Model version 2 (CESM2; Danabasoglu et al. 2020) with a grid of nominal 1/10° horizontal spacing and 62 vertical levels (termed CESM-H). In the NATRE region, the vertical grid spacing is 90–155 m between depths of 800 and 1500 m. The model configuration is similar to that of Bryan and Bachman (2015) but is instead forced using the Japanese 55-yr Reanalysis (JRA55) dataset (Tsujino et al. 2018). This simulation uses the K-profile parameterization (KPP) scheme (Large et al. 1994) to parameterize vertical mixing and biharmonic viscosity and diffusivity to represent subgrid-scale horizontal stirring and eventual mixing. Biharmonic viscosity and diffusivity values vary with the cube of the grid spacing and have equatorial values of 2.7 × 1010 and 3 × 109 m4 s−1, respectively. This simulation simulates the salinity field associated with the Mediterranean outflow with reasonable fidelity (Fig. 1b).
2) CESM-L POP 1°
We diagnose the spinup of a lower-resolution simulation, termed CESM-L, using the CESM2 (Danabasoglu et al. 2020) ocean component z-coordinate model POP2 (Smith et al. 2010) at a nominal spacing of 1° and 60 vertical levels with a spacing of 90–155 m between depths of 800 and 1500 m (same as the previously described CESM-H simulation). This simulation is initialized with the World Ocean Atlas 2018 (Boyer et al. 2018) temperature and salinity fields and zero velocities following the Ocean Model Intercomparison Project (OMIP) protocol (Griffies et al. 2016). The simulation is integrated forwards for six cycles or repeats of the JRA55 surface forcing (Tsujino et al. 2018).
This simulation does not resolve mesoscale eddies and relies on an isopycnal Redi diffusivity applied using the discretization of Griffies et al. (1998) to model along-isopycnal eddy stirring, variance generation, and eventual dissipation. The isopycnal diffusivity formulation is identical to that in CESM1 (Danabasoglu et al. 2012), with the exception of increased values at depth [600 m2 s−1 instead of 300 m2 s−1 in CESM1 (Danabasoglu et al. 2020)]. The diffusivity can be as large as 3000 m2 s−1 near the surface and decreases with depth as a function of buoyancy frequency N (Danabasoglu and Marshall 2007) with a minimum value of 600 m2 s−1 at depths deeper than approximately 2000 m. No other lateral diffusivity is applied. This simulation uses the KPP scheme (Large et al. 1994) to parameterize vertical mixing.
3) ECCOv4r4
The ECCO project provides a dynamically consistent global ocean state estimate for the 1992–2011 period, constrained using a number of remote sensing and in situ datasets (Forget et al. 2015a). This configuration uses a grid with approximately 1° horizontal spacing at the equator and 50 vertical levels with grid spacings of approximately 100 m in the NATRE region in the 800–1500-dbar range. A highlight of version 4 is that the time-invariant three-dimensional fields of diapycnal diffusivity, isopycnal Redi diffusivity Ke, and the Gent et al. (1995) coefficient are adjusted subject to the data constraints provided, starting from constant first guesses of 10−5, 10−3, and 103 m2 s−1, respectively. These adjustments significantly improve the representation of the mean state, reduce model drift, and are mostly sensitive to the constraints provided by the Argo dataset (Forget et al. 2015b).
4. Results: Microstructure and mesoscale-resolving simulations
a. Microstructure estimate: NATRE
For the NATRE region, Ferrari and Polzin (2005) estimate the first term in (7)
Mesoscale and microscale variance production and dissipation terms averaged along density surfaces over the NATRE region (Fig. 1) for a variety of datasets. The 800–1500-m depth range is highlighted. (a) NATRE microscale variance budget presented by Ferrari and Polzin (2005) (red, black, labeled FP2005). The χe estimated as residual using the NATRE data (purple bars) agrees quite well with χe from CESM-H POP2 1/10° simulation (solid purple; Guo et al. 2022). (b) Mesoscale variance budget terms from Guo et al. (2022) illustrating an approximate three-term balance between lateral stirring (red), vertical stirring (blue), and lateral dissipation χe (purple). (c) The χe estimates using the Ke estimates of Groeskamp et al. (2020b) and Cole et al. (2015) and
Citation: Journal of Physical Oceanography 54, 5; 10.1175/JPO-D-23-0135.1
We are able to reproduce their Fig. 10 in our Fig. 4a. We choose to use potential temperature and practical salinity, so that we can reproduce the usage of a neutral density variable by Ferrari and Polzin (2005) and ensure that our results are directly comparable. Between approximately 800 and 1500 m (highlighted), the rate of variance dissipation 〈χ〉/2 exceeds the variance produced by microscale stirring of the mean
For the remainder of the paper, keep in mind that the microstructure estimate suggests that in the top 2000 m of the NATRE region, mesoscale stirring of the mean is the dominant variance production term between approximately 800 and 1500 m, and microscale stirring of the mean vertical gradient dominates the rest of the water column. We now examine whether numerical simulations reproduce this vertical dependence of the approximate variance budget balance.
b. Diagnosing a mesoscale-resolving simulation: CESM-H POP2 1/10°
Figure 4b presents the three term balance in (13) from their analysis, horizontally averaged over the 400 km × 400 km NATRE region and time averaged over the years 2000–19. The vertical averaging scale is inherited from the choice of model vertical grid, which has grid spacings of 90–155 m between depths of 800 and 1500 m. These spacings are comparable to the 100-m averaging scale used by Ferrari and Polzin (2005) and in section 4a. In the top 800 m of the water column, spiciness or
Diagnosing the spinup of a POP2 1° simulation, and ECCO, in the NATRE region. The 800–1500-m depth range is highlighted. (a) Along-isopycnal diffusivities Ke from the POP2 integration averaged over the first month (red) and the sixth decade of integration (blue) and estimates from Groeskamp et al. (2020b) (green) and Cole et al. (2015) (black dashed). For comparison, we also present an effective diffusivity
Citation: Journal of Physical Oceanography 54, 5; 10.1175/JPO-D-23-0135.1
Between ∼800 and 1500 m, spiciness is large. Here, eddy stirring is effective at generating T and S anomalies that are density-compensated and have almost no density or EPE signal. Such compensated variance is cascaded down to the grid scale for dissipation by a lateral diffusivity. So, χe balances the horizontal stirring term while the vertical mesoscale stirring term is weak (Fig. 4b).
We can now directly compare χe in this simulation to the residual computed using the microstructure estimates (section 4a). We find a remarkable agreement between the two in that the simulated variance dissipation is within the error bars of the residual from the observations. Note that the only comparable previous analysis of Smith and Ferrari (2009) used a quasigeostrophic model at 1-km resolution, while Guo et al. (2022) present a closed variance budget for the mesoscale in a realistically forced mesoscale-resolving primitive equation simulation.
5. Results: Diagnosing coarser simulations
Coarse climate models represent the effect of along-isopycnal stirring using a Redi (1982) diffusivity Ke applied along isopycnal surfaces (treated as approximately neutral surfaces). Cole et al. (2015) and Groeskamp et al. (2020b) present observational estimates for isopycnal Ke applicable to such coarse models. With coarser horizontal grid spacings of 1/4° or larger, such models cannot resolve, or at best only partially resolve, the mean → mesoscale pathway. For such models, we estimate χe as the variance dissipated by the application of along-isopycnal diffusivity and compare to the microstructure residual (Fig. 3d). Next, we explore whether such a framework yields insight into the fidelity of the diffusivity estimates and coarse models. Doing so is complicated by the fact that such models are usually deficient in other areas. A relevant deficiency for this analysis is a lack of fidelity in simulating the Mediterranean outflow (Fig. 1). In variance budget terms, if the model is unable to maintain the along-isopycnal water mass contrast it is initialized with, then it is not going to replicate the right χe, even if it applied the right diffusivities.
a. Assessing eddy diffusivity estimates derived from observations
Variance production rate χe associated with the mesoscale eddy diffusivity estimates of Cole et al. (2015) and Groeskamp et al. (2020b) is estimated as
b. Diagnosing CESM-L POP2 1° spinup
We diagnose the spin up of the circulation comparing the first month and last decade of the first cycle of forcing. Simulation outputs include the monthly mean Redi diffusivity Ke and T, S fields. We interpolate monthly mean T and Ke to isopycnal surfaces, estimate
Averaged over the NATRE box for the first month of integration, χe compares quite well to the microstructure residual at approximately 1000 dbar (Fig. 5c). Being initialized from observations, the initial along-isopycnal gradients agrees well with observations (Fig. 5b). So, when a relatively accurate along-isopycnal gradient exists, the right amount of variance is dissipated. Deeper down between 1500 and 2000 dbar,
One possible interpretation is that at least in this region, the model is not overly diffusive at 1000 dbar but instead has a problem maintaining the water mass contrast along isopycnals through the advection of the Mediterranean outflow. This interpretation is supported by the isopycnal salinity maps in Fig. 1c where we see that the along-isopycnal salinity gradient is significantly weaker than that in the observations much closer to the mouth of the Mediterranean (e.g., see 30°N, 20°W). In other words, errors in variance budget at 1000 dbar appear to arise from errors in the simulation of the mean state, rather than from errors in parameterizing the mesoscale in the NATRE region.
Between 1500 and 2000 dbar, the vertical profile of Ke does not decay with depth as quickly as the inferred decay of Ke from observations (Groeskamp et al. 2020b; Cole et al. 2015). These high Ke values appear responsible for too much lateral dissipation in the model below 1500 dbar. However, remember that both the microstructure measurements and the 1/10° model suggest that microscale turbulence is the dominant stirring term at these depths for the temperature variance budget. Thus, inaccuracies in Ke and χe are of minor consequence for the model’s simulation of the mean temperature field, but might be more consequential for other tracers. Indeed, Danabasoglu et al. (2020) mention that enhanced Ke values at depth are used to improve the representation of passive tracers.
c. Interpreting ECCOV4r4 Ke adjustments
The ECCO adjustment process begins with a first guess for Ke specified as a constant value of 1000 m2 s−1. The adjusted Ke has significant vertical structure; it is large in the top 500 m and below 2000 m, where gradients are quite weak (Fig. 5a). A middepth increase is seen between 800 and 1500 m, exactly where
6. Discussion
We presented a novel attempt at analyzing the representation of mesoscale eddy stirring in production configurations of ocean general circulation models through a comparison against Ferrari and Polzin (2005)’s interpretation of the NATRE microstructure data (section 4a). Framing the discussion of mesoscale stirring in terms of χ, the rate of dissipation of temperature variance, provides an interesting view on observational estimates and model parameterizations of along-isopycnal eddy diffusivity Ke. For the NATRE region, we find that the variance dissipated in the CESM-H POP2 1/10° simulation analyzed by Guo et al. (2022) agrees very well with an estimate of χe derived from the Ferrari and Polzin (2005) microstructure analysis (section 4b). Applying a similar framework to a 1° CESM-L POP2 simulation with parameterized mesoscale diffusivity paints the model as being unable to maintain the isopycnal water mass contrast between the Mediterranean outflow and ambient waters, upstream of the NATRE region (section 5b). Analysis of the ECCOV4r4 state estimate with Ke adjusted to minimize misfit of the solution suggests caution in interpreting the adjusted Ke as indicative of physical processes (section 5c).
Strong inferences are lacking. For one, the method relies on the opportunistic use of temperature as a passive tracer, and so is limited to regions of large-scale T–S compensation (spiciness). Second, the method requires a large number of microstructure measurements, distributed over a large area. The NATRE (Ferrari and Polzin 2005) and DIMES (Naveira Garabato et al. 2016) datasets are unique in this regard, but ultimately represent a small part of the ocean. Even then, the error bars are quite large and prevent concrete quantitative insights at the moment. The above considerations imply that a direct model–data comparison, as demonstrated here, is of limited utility in developing new mesoscale parameterizations or quantitatively judging high-resolution simulations. However, microstructure data collection is increasing rapidly, including on novel platforms such as temperature microstructure measurements on Global Ocean Ship-Based Hydrographic Investigations Program (GO-SHIP) CTD rosettes (Goto et al. 2018), and potentially both shear and temperature microstructure on Argo floats in the future (Roemmich et al. 2019). Expanded collection of microstructure data, analyzed in concert with careful analysis of high-resolution mesoscale-resolving models (e.g., Guo et al. 2022) as presented here, might yield more useful insights in the future. Finally, we suggest that the use of a variance budget framework, and specifically χe as a metric, appears to be a promising way to compare high-resolution and low-resolution ocean models.
Acknowledgments.
DAC was funded by NASA Physical Oceanography Grant 80NSSC19K1234. We thank Emily Shroyer for incredible mentoring support and multiple insightful discussions during the conception of this project. We also thank Keith Lindsay for sharing the CESM-L 1° simulation output, Kurt Polzin and Sjoerd Groeskamp for insightful discussions, and Kurt Polzin and Ray Schmitt for making the NATRE microstructure data publicly available at https://microstructure.ucsd.edu. The analysis presented here was facilitated by many scientific Python packages, particularly Xarray (Hoyer and Hamman 2017; Hoyer et al. 2023), xgcm (Abernathey et al. 2022b), Matplotlib (Caswell et al. 2023; Hunter 2007), and Cartopy (Met Office 2010; Elson et al. 2022). We would like to acknowledge high-performance computing support from Cheyenne (https://doi.org/10.5065/D6RX99HX) provided by NCAR’s Computational and Information Systems Laboratory, sponsored by the National Science Foundation (Computational and Information Systems Laboratory 2019). This material is based on work supported by the National Center for Atmospheric Research, which is a major facility sponsored by the National Science Foundation under Cooperative Agreement 1852977.
Data availability statement.
Datasets for terms in Figs. 3 and 4 and the code to reproduce these figures are provided online at https://github.com/dcherian/cherian-2023-eddydiff. The MITgcm modifications to support extra diagnostic output are available at https://github.com/dcherian/MITgcm/tree/chi-diags. Rerunning the simulation should be possible following the instructions in Wang and Fenty (2023). These datasets represent small subsets (time averages over the NATRE region) of large simulations, but should still be useful for comparison purposes. The dataset from Cole et al. (2015) is publicly available at Cole et al. (2018). The datasets from Groeskamp et al. (2020b) are publicly available at Groeskamp et al. (2020a).
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